Paramisgurnus dabryanus (large-scale loach): 135785215
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Entry
135785215 CDS
T10799
Symbol
rbbp4
Name
(RefSeq) histone-binding protein RBBP4
KO
K10752
histone-binding protein RBBP4
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03082
ATP-dependent chromatin remodeling
pdab03083
Polycomb repressive complex
pdab04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
135785215 (rbbp4)
03083 Polycomb repressive complex
135785215 (rbbp4)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
135785215 (rbbp4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135785215 (rbbp4)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
135785215 (rbbp4)
Histone modification proteins
HAT complexes
HATB complex
135785215 (rbbp4)
HDAC complexes
Sin3A-HDAC complex
135785215 (rbbp4)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
135785215 (rbbp4)
PRC2.2
135785215 (rbbp4)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
135785215 (rbbp4)
Heterochromatin formation proteins
Other heterochromatin formation proteins
135785215 (rbbp4)
Chromatin remodeling factors
NuRD complex
135785215 (rbbp4)
NuRF complex
135785215 (rbbp4)
NuRF complex (fruit fly)
135785215 (rbbp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_RIG_1st
ANAPC4_WD40
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
135785215
NCBI-ProteinID:
XP_065150658
LinkDB
All DBs
Position
19:complement(28206983..28211878)
Genome browser
AA seq
424 aa
AA seq
DB search
MADKEAAFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKD
FSVHRLVLGTHTSDEQNHLVIASVQLPNDDAQFDASNYDSEKGEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEG
YGLSWNPNLSGCLLSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAE
DGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAADT
EVQG
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaaagaagcggcatttgatgacgcggtggaggagagggtgatcaatgaagaa
tacaaaatatggaagaaaaacactccgtttctatatgatctggtgatgacccacgctttg
gagtggcccagtcttactgctcagtggttgccagatgtcaccagacctgaaggaaaggat
tttagtgtgcaccgtcttgttctcggcacacatacctcagatgagcagaaccacctggtt
attgccagcgttcagctgcccaatgatgatgcccaatttgatgcctcaaattatgacagt
gaaaaaggagaatttggtggttttggctcagtgagtggcaagatagagattgagattaag
attaatcacgagggagaggtgaaccgggctcgctacatgccacagaacccctgcattatt
gccaccaaaaccccaactagtgatgtgctggtctttgactacacaaagcacccctctaaa
ccagacccctctggagaatgcacccctgacttgcgtttaagagggcatcagaaagagggt
tacggtctatcctggaaccccaacttgagcggttgcttgctgagtgcatctgatgaccat
actatctgtctgtgggacatcagcacagtgccaaaagagggaaagatagtggacgctaag
accattttcactggtcacactgctgtagtggaagacgtgtcttggcatttgctgcacgag
tcactgtttgggtcagtggctgatgaccagaagctaatgatctgggacacacggtccaat
aacacatccaaacccagtcatgcagtggatgcccacactgcagaagtcaactgcttgtcc
tttaacccctacagcgaatttattctggccactggttctgctgacaaaactgtcgcattg
tgggatctgcgaaacctcaagctgaaacttcactcttttgagtcgcacaaagacgaaatc
ttccaggttcaatggtcaccccataatgagaccatcctggcctctagcggaacagacagg
aggctcaatgtctgggacctcagtaaaattggtgaggaacaatcaccagaagatgcagag
gatggtcctccagagctattgtttatccacggaggccatactgctaagatttcagacttt
tcctggaatccgaatgaaccatgggtgatttgctcggtgtctgaggacaatatcatgcaa
gtctggcaaatggctgaaaacatttacaatgatgaagacccagaaggggcagcagacact
gaagtccagggataa
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