Paramisgurnus dabryanus (large-scale loach): 135785305
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Entry
135785305 CDS
T10799
Symbol
trpc1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdab04040
]
135785305 (trpc1)
Ion channels [BR:
pdab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
135785305 (trpc1)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
135785305
NCBI-ProteinID:
XP_065150747
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Position
22:complement(5834555..6038780)
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AA seq
807 aa
AA seq
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MTVLPSTISSVQRFKVPAVCLVLIFLWMGTDSSSPDKYLALKDVREVKEETTLDEKLFLL
ACEKGDYYMVKKLLEEKRQGELNINCVDVLGRDAVTIVIENENLDILQLLLDHGCQATDA
LLVAIDAEVVGAVDILLNHRPRRSSKPSMAKLMQRIQNPEYSTTMDVAPVILAAHRNNYE
ILTMLLKQDISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDP
ILRAFELSADLKELSLVEVEFRNDYEELAKQCKMFATDLLAQARNSRELEVILNHTSSED
HINKRGLLEERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKILS
VLSVALLWPLLSVCYLLGPRSRVGHVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNEDKK
NTMGPALELIDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALK
VVAHSQFKNKEETERKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMG
QMLQEFGKFLGLFLLVLISFTIGLTQLYGKDEKDPARSKDENKDCQGIFCQRQSNDTFYT
FMGTCYALFWYIFSLAHVALFVTRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLH
KSFRQIANHEDKEWKFARAKLWLSYFDDKCTLPPPFNILPSPKTVCYLLVSLSKWICSHT
STGKVQRQNSLKEWKNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLHDLRQ
DLSKFRNEMRDLLGFRTSKYAMFYPRS
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgacagttctaccttcaaccatttcctcagttcaaaggttcaaagtgccggcagtttgt
ctagtgctgatatttctgtggatgggcacggactcgtcctctccggataaatatctggcg
ttaaaggacgtcagagaggtgaaggaggagaccactttggatgagaagctctttctgttg
gcctgcgagaagggtgattattatatggtaaagaagcttcttgaggagaaacgacaaggt
gaattaaacattaactgtgttgatgtgctggggagagatgctgtcaccattgtaattgaa
aatgagaatctagacattttgcagttgctcttagaccatggctgccaggccacagatgca
ttattagtggctattgatgcagaagttgtaggagctgttgatatcctgctgaaccatcgg
cctagacgttcttcaaagccttccatggcgaaattgatgcagcgcatccagaacccagag
tattcaactaccatggatgttgctccagtcattcttgcagcccacaggaacaattatgag
attctgaccatgctattaaagcaggacatctcgcttcccagaccccacgctgttggttgc
gagtgcaccctctgcaatgcaaagaacaagaaggacagtcttcgtcactcaaggtttcgt
ctagatatctaccggtgccttgccagcccatctttgatcatgcttacagaagaagacccc
attctcagagcttttgagctcagtgctgacctgaaagagctaagcctggtggaagtggag
tttcggaatgattatgaagagcttgctaaacagtgcaagatgtttgccacagacctgttg
gctcaggcccgtaactctcgtgagctggaggtcatactaaaccacacgtccagtgaggac
cacatcaacaaaagagggctgcttgaggagcgcatgaacctcagtcgactcaaactggcc
atcaaatacaaccaaaaggagtttgtggcccaatccaactgtcagcagtttctgaacaca
gtgtggtttggagagatggcaagctatcgacgcaagcacacatgcttaaagatcctgtct
gttttgagcgtggcgctgctgtggccgctgttgtccgtctgctacctgctgggacctcga
tctcgtgttggccatgtcatccacacaccgtttgtcaaattcatcatccatagcgcctcc
tactttacctttctgctgcttctaaacttgtactcactggtctacaatgaggataaaaag
aataccatgggtcctgctttagaactgattgactaccttcttatcctctggatcattggt
atggtgtggtcagacgtgaaacgtctgtggtatgagggattggaggatttccttgaagag
tcacgaaaccagctgagtttcgtcatgaattccctttatttggccaccttcgctctgaaa
gtggtggctcacagccagtttaaaaataaagaagagacggagagaaaaaactgggatgcg
ttccatccgatcctcgttgctgaaggcctttttgcttttgccaatgttctgagttatctg
cgtctcttcttcatgtacaccaccagctccatcttggggccgttacagatctccatgggc
caaatgcttcaagagtttgggaagtttcttggcttgttccttctggtgctcatttctttc
accatcggcctgacacagctgtacggaaaggatgagaaggatccagccaggagcaaagat
gaaaacaaagactgccaaggcatcttctgtcagcggcagagcaacgacacgttttacacg
tttatgggaacatgttatgccctcttttggtacattttctccctggcacatgtggctttg
ttcgtcacgaggatcagttacacagaggagctgcgttcatttgtcggcgctcttattgtc
gggacgtacaacattgttgtggtgatcgttcttaccaaactcctggtggctatgctgcac
aagagcttcagacaaatcgctaaccatgaagataaggagtggaagttcgcccgtgccaag
ctgtggctcagctactttgatgacaaatgcactctgcctccacctttcaacatcctcccc
tcgcccaagactgtttgttatctgctggtcagcttgagcaaatggatctgttctcataca
tccacaggcaaagtccagagacagaacagtctcaaggaatggaagaacctcaaacagaag
agagatgagaattaccagaagatcatgtgttgtcttgtgcaccgctatctgacttccaca
cgccaaaagatgcaaagcacagaccaggccacagtggagaacctccatgatctgcgtcaa
gacctctccaagtttcgcaatgaaatgagggaccttctgggcttccgcacctccaaatat
gccatgttctaccccagaagctaa
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