Paramisgurnus dabryanus (large-scale loach): 135785705
Help
Entry
135785705 CDS
T10799
Symbol
abca1a
Name
(RefSeq) phospholipid-transporting ATPase ABCA1a isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab02010
ABC transporters
pdab04148
Efferocytosis
Brite
Transporters [BR:
pdab02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
135785705 (abca1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_22
DUF7447
Motif
Other DBs
NCBI-GeneID:
135785705
NCBI-ProteinID:
XP_065151247
LinkDB
All DBs
Position
4:complement(23783731..23813750)
Genome browser
AA seq
2268 aa
AA seq
DB search
MAVSTQLGLLLWKNFTCRRRQTIQLLIEIIWPLFIFFILISVRYHYPPHEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGESPGVVGNFNDSIISRLFIDAKKILLYSQHDK
SFEGFKGLVRALRKLQQNTEGFKLKDFLRDNETLSEFLERNASLPEHAVREIVEANVNLE
KVLIGGFGVHLRDLCNSTSLEDFVTIADKNVSQLTQNIICQSSTEWLNNAESHFLSNLDF
LKPIRKDVKSDPKIIQDVSTATDSLLESLGALAVELASMKSWRDMRTEILFLTGNSMQSP
NHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGTHGNDSEEESASVYDNSSTPYC
NSLMKGLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIQEVNKTFQEFGVLRDLGGM
WEEMRPKIWNFMEHSEEMDLVRTLLQNNASARFFNAKLTGTEWRVEDVSSFLSKASEDTR
PNGTAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMRLLDDRKFWAGI
VFPDMQKNTSELPLNINYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYL
QDVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDMFLQVMSRSMPLFMTLAWMYSVAIII
KGIVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPG
VVYLFLTSFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
VIVSLLSPVAFGYGCEYFALFEEQGVGIQWSNLLSSPLEEDNYSLTTSISLMLFDAVLYG
IMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGGMTSVSTNKKENAEAICMEEEPAHL
SPGVYIENLVKVYNNGKLAVDDLSLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIMGKDIRTDLSTIRQNLGVCPQHNVLFSMLTVEEHIWFYARLKGLSEEKVKSEMKQIV
TDLGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKDFDL
SASSCRTSSSVASYSKGSLKKEDSVSESSSDAGLGSDHESETTTIDISLISNVIFKHVPT
ARLVEDLGHEITYVLPYEYAKVGGFVELFHEIDDRLTDLGISSYGISDTTLEEIFLKVAE
DNGVDAEMSDGILPARRNRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLGGADG
KGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGK
YPSLALKPSMYEEQFTFISNDAPEDGHTNRLLEALTDNPVYTEKCSGKQKAIGTSCPIED
GKWVTPEVPESVRDVFLKGNWSMENPSPLCECSCEGRKKMLPECPPAAGGLPPPQIKVTT
TETLQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQALPPPDEIND
AISQIRNRFSLKAGTAADRFLAGLSSFIRGLDTKNNVKIWFNNKGWHSIGAFLNVMNNAV
LRANMPAGPESSKFSINVFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFV
VFLIQERVNKAKHMQFISGVQPLLYWLANFMWDMCNYIVPATLVIIIFVCFQQEAYVSST
NLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGS
NEIGGINNILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNL
FAMAVEGVVFFTITVLIQYRFCIKARSVSTKLQPIGEEDEDVARERQRILGGGGQTDILE
LKQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYLA
GKSVLTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVADWGIRKLG
LIKYVDKLAGSYSGGNMRKLSTAMALIGCPPVVFLDEPTTGMDPKARRALWNCILSIIKE
GRSVLLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIILRVAGSDPQLE
PVMEFIERELPGSNLKEKHRNMLQYQLPSSLTSLARIFNILAKNKEQLHIEDYSVSQTTL
DQVFVNFAKDQSDEDHLKDISINKGDAVVDISQLDAFLTDEKAKETVV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccacacagttagggttactgttgtggaagaacttcacttgcagacggaga
caaactattcagctgctgatcgagataatatggcctctcttcatcttcttcatcctgata
tctgtcagatatcactatcctccacatgagcaacatgaatgtcactttcccaataaggcc
atgccctctgcgggaacgttaccctgggtgcagggcatcatatgcaatgccaacaaccct
tgttttcgctaccccactccgggagagagtccaggggtggtgggcaacttcaacgactcc
attatctcccgattgttcatcgatgccaagaaaattctcctctacagtcaacatgacaag
agctttgaaggttttaaaggactagttcgagcattgagaaagctacagcaaaacactgaa
ggtttcaagctcaaggacttcttgcgtgataatgaaacgttgtctgagtttctggagagg
aacgcctctctgcccgagcatgctgtgagagagatagtggaggccaacgtcaacttggag
aaggtgctcattggcggatttggagttcacctgagagatctgtgcaattccacgtctctg
gaggatttcgtgacaatagccgataaaaacgtttcccagctgacacaaaacatcatctgc
caatcatctactgaatggctgaacaacgcagaaagccacttcctctccaacctcgatttc
ctgaagccaatacggaaagatgttaaatctgacccaaagattatccaagatgtgtccacg
gcgaccgatagcctgttggagagcctgggagcattagcagtggagcttgcgagtatgaag
agctggcgagacatgcggacagagatcctcttcttgacgggaaacagcatgcaatccccc
aaccacatgtaccaggccgtgtcccgcatcgtctgcggccacccggagggaggcggtctc
aagatcaagtcccttaactggtacgaggataacaactacaaagcactgttcggcacccac
ggcaatgacagcgaagaagagtctgcgtctgtttacgacaactcctccacgccctattgt
aacagcttgatgaagggtttggagtccagtcccatttctcgtatgatctggagggctttg
aaaccactgctcatggggaagatcttgtacacgccagatacacccgccacccaaaggatc
atacaggaggtcaacaaaacgtttcaagagttcggggtgctcagagatctcgggggcatg
tgggaggagatgagaccaaaaatctggaacttcatggagcacagcgaggaaatggacctg
gttaggacactgctacagaacaacgctagcgctcgtttcttcaacgccaagctgaccggg
acagaatggcgcgtggaggacgtgtccagctttctgtctaaggcctccgaggacacgcgt
cccaacggaacggcatacacgtggcgagaggttttcaacgagaccgatcaggccatacaa
accatctctcgatttatggagtgtgtgaatctggataaattggagccggtggccaatgag
gaacgcttagtaaacaagtccatgcgtctgctggatgaccgtaaattctgggccggcatc
gtgtttcctgatatgcagaagaacacatctgaactgccactcaacatcaactataagata
cgaatggacattgataacgtggaacgcaccaacaagatcaaggatggatactgggaccct
ggtcctcgagcagacccatttgaagatctgcgttacatctggggcggattctcttacctg
caggatgttattgagcatggaatcataagagcgctgacaggcagcaaagagaaaactgga
gtttatattcaacagatgccttatccctgctatgtggatgacatgtttctgcaggtcatg
agtcgctccatgcctcttttcatgactctagcctggatgtactcggtggcgatcatcatc
aaaggtattgtgtatgagaaggaggcgcgtctgaaggagaccatgaggattatgggtctg
gataatggaatattatggctgagctggttcatcagtagcttgataccattgctcatcagc
gccgccctactggtgctcattctgaagatggggaatctactgccttacagtgaccccggg
gttgtgtacttgttcctgacttccttcgctgttgtgaccatcatgcagtgtttcctaatc
agcacacttttctcacgtgctaacctcgccgctgcctgcgggggcatcatatacttcacc
ctctacctgccctatgttctctgtgtggcctggcaggattacgtgggctttggggccaaa
gtgattgtgagtctgctgtcccctgtggcttttggctacgggtgcgagtacttcgctctg
tttgaggaacagggtgtggggatacagtggagtaacctgctctccagccctctggaggaa
gacaattacagtctcaccacatccatctctctcatgctatttgatgcagtgctgtacggc
attatgacctggtacatcgaagctgtgttcccgggccagtatggcatcccacgtccatgg
tacttcccattcaccaagtcctactggtgtggagagaaatgtggcggaatgacatcagtg
tctaccaacaagaaagaaaatgctgaagccatttgcatggaagaagagccagcccacttg
tcccctggtgtttacatcgagaacctggtgaaggtctacaataatgggaaactggcggtg
gatgatttgagtctaggcttttatgaaggccagatcacctccttcctgggtcacaacggt
gctggaaaaaccacaaccatgtctattctcaccggcctgttcccacccacctcgggcaca
gcttacatcatgggcaaagacattcgcacggatctgagtactatacgtcaaaacctggga
gtgtgtccacagcataacgtcttatttagcatgctcaccgttgaggaacacatctggttc
tacgcacgtctgaagggtttgtccgaggagaaggtgaaatccgagatgaagcagatcgtg
acggacctcggcctgccccataaacgcaaatctcgcaccagtcagctctcaggaggtatg
cagaggaagctatctgtcgctctggcatttgtcggaggatcaaaggtcgtgattctggac
gaacctactgccggagtcgatccatattcccgtcgaggcatctgggacttactgctgaaa
tatcgtcaaggtcgcacgatcatcctctctacccaccacatggacgaagccgatatcctg
ggtgatcgcattgccattatctcccatgggaagctctgctgtgtgggttcctcgctgttc
ctcaaaacccagctgggaacgggatactaccttacgctagtcaaaaaagactttgatctg
tccgcaagctcatgccgcacctccagcagcgttgcctcatattccaagggaagccttaag
aaggaggacagcgtgtctgagagcagttctgatgctggactgggcagtgaccatgaaagt
gaaaccaccacaatagatatctccctcatctccaacgtgattttcaagcacgttcctaca
gccagactggttgaagacctgggtcatgagatcacatacgttctgccctatgagtacgcc
aaagtcggagggtttgtggagcttttccacgagattgacgatcgcctgaccgacctcggc
atttctagctatggcatatctgatacgactctggaggagatcttcctcaaagtcgccgag
gacaatggggtggatgccgaaatgtcagatgggattctgcccgctcgcaggaaccgcagg
catgctttcggtgaccatcagagctgtttgaagccgtttactgaagatgactttgatttc
aatgattcagaaggtgatccagaatcacgggagacggactggttgggcggtgctgatggt
aagggatcgtaccaggtgaagggctggagtctgaagagacagcagtttgtggctttactc
tggaagcgattcctctacgcccgacgttcccggaaaggtttcttcgctcagatcgttctg
cctgctgtcttcgtgtgcatcgccctggtcttcagtctcatcgtacctccctttggaaag
tatccgagcctcgctcttaaacccagcatgtatgaggagcagttcacctttatcagcaat
gatgcacctgaagacggacacacaaacaggttacttgaagctcttacggacaatccggtt
tacactgaaaaatgctcagggaaacagaaagcgattggcacatcatgtccgatcgaagat
ggaaaatgggtgactccagaggttccagaaagcgttcgggatgtgttcctgaagggaaac
tggagcatggaaaacccatcgcctctgtgtgaatgcagctgtgagggacggaaaaagatg
cttccagaatgtccaccggcagcaggtggtctacctccgccacagattaaagtcaccact
actgaaaccttacagaatctgacaggcagaaatatctcagattatttggtgaaaacatac
gctcagattatcggcaaaagcttgaaaaacaaactctgggtcaacgaattcaggtacggc
ggattctcgttgggtgctagaagttcacaggccctacctcctcccgatgagatcaatgat
gccatctctcagattcgcaaccgcttcagtctaaaagctggaactgcagccgatcgcttt
ctggcaggcctgtcgtcatttatccgaggtctcgacaccaagaacaatgtaaagatctgg
tttaataacaagggctggcacagtatcggagcgttcctcaatgtcatgaacaatgccgtc
ctgcgtgctaatatgcctgccggccccgagagttcaaagttcagcatcaatgtgttcaac
cacccgctcaatctgaccaaagagcagctatcgcaggtggccctaatgacaacctcagtg
gacgtgctggtgtccatctgcgtcatcttcgccatgtccttcgtcccggccagttttgtg
gtcttcctcatccaggagagggtgaataaagccaaacacatgcagttcattagtggagtg
cagcctttgctatactggctggccaactttatgtgggatatgtgcaactacattgtccca
gcgacgttggtcatcatcatcttcgtctgttttcagcaggaagcctacgtctcttccact
aaccttcctgttcttgctctattgttgttgctatatgggtggtccataacacccctgatg
tacccggcatcattcttctttaagatcccaagtacagcgtatgtggtattgacgagcgtc
aacatcctcattgggattaatggaagtgtgtccacatttgtcctggagctttttggcagc
aacgagattggcggcatcaacaacatcttgaagaacgtgttcctgatcttccctcacttc
tgtctgggcagaggtctcattgacatggtgaagaatcaagcgatggctgacgctctggag
agattcggtgagaatcgatttcggtctcctctagcgtgggatatggtgggcaaaaatctc
tttgccatggctgtagaaggcgtggttttcttcactatcaccgttcttatccagtatcgt
ttctgcatcaaggccagatcggttagcactaagctccagccaataggagaggaggatgaa
gacgtggccagagagaggcaaaggattttgggaggagggggccagacggacatcctggaa
ctcaaacagctcacaaaggtgtataagagaaaacagaaaccagctgtagatcgactttgt
gtgggcatcccgccaggagagtgtttcgggttactcggtgtgaacggtgctgggaagacg
agcacattcaagatgctcactggagattctgtggtcactagcggagaggcttacttagca
ggcaagagcgtgttgacagaaatcgacgaagtccatcagaacatgggatactgtccgcaa
tttgatgccatcaatgacctgctgaccggccgggagcatctggagttttacgccattttg
cggggcgtcccggagaaagaagtgtgcgaggtggcagactggggaatccgtaaactggga
ctgattaaatatgtggacaaactagcgggaagctacagtggaggaaacatgcgaaaactc
tccaccgccatggcgctcattggttgcccacctgtggttttcttggacgaacccaccact
gggatggaccccaaagccagacgggccctgtggaactgcatcctcagcatcattaaagag
ggacgctcggtccttctgacatcacacagtatggaggagtgtgaggctctctgcactcgt
atggccatcatggtcaacggcaggtttcgctgtctgggcagcgtgcagcacttaaaaaac
aggttcggggatgggtacaccatcatcctgcgggtggccggttccgatccgcagctggag
ccggtgatggagttcatcgagcgggagctgccgggcagcaacctcaaagagaaacacaga
aacatgctgcagtaccagctgccctcctcccttacctccctcgctcgcatcttcaacatc
ctcgccaagaacaaagagcaactccacatcgaggattactccgtctcacagaccacctta
gaccaagtatttgttaattttgccaaggaccaaagtgacgaggaccacttaaaagacatt
tccattaacaaaggcgatgccgtggtggacatttctcaactagacgccttcctcacggac
gagaaggccaaagagactgtggtgtga
DBGET
integrated database retrieval system
