Paramisgurnus dabryanus (large-scale loach): 135785818
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Entry
135785818 CDS
T10799
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
135785818 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdab03021
]
135785818 (taf5)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135785818 (taf5)
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
135785818 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
135785818 (taf5)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
135785818 (taf5)
STAGA complex
135785818 (taf5)
TFTC complex
135785818 (taf5)
SAGA complex
135785818 (taf5)
SLIK complex
135785818 (taf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD_LRWD1
Beta-prop_Nup120_160
PEP5_VPS11_N
Beta-prop_IP5PC_F
VPS8_N
LisH_TPL
RAB3GAP2_N
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
135785818
NCBI-ProteinID:
XP_065151458
LinkDB
All DBs
Position
4:complement(25684139..25688527)
Genome browser
AA seq
745 aa
AA seq
DB search
MAAVQDGTIELDTEKETKPEILSDGSVKLAGNTGSGALSTLPPAGGGAPKMEDQQTLIAV
LQFLKRNKLTESVDILRREAGLSDDQEDSQGADAGGGGLGAGGKGDGDGVDAKSLLNRVS
IASAAAPQSAPLPAKSGEDQPDVSVVLSAYTQQGDPSLYKVYYSDLKKFIESVLDCHRAE
LSQLFYPLFVHMYLELVYNNHETEAKAFFEKFSGDQECYYEDDLRVLCGLTKKEHMKGNE
ALLDFRTSRFVLRISRDSYQLLKRHLQERQNNQIWNIIQEHLYIDIFDGMPRSKGQIDSM
SGSLGGEAKREVNKVKVYYGLLKEPEIEVPLDDEDDEAENEEGKPKKKKAKKDSMGSKSK
KQDPNAPQQNRIPLPELKDSDKLDKIMYMKESTKRIRLSPDNLPSVCFYTFLNAYQGLTA
VDFTDDSSLLAGGFADSTVRVWSVTPKKLRKVKSAADLNLIDKESDDVLERIMDEKTASE
SKILHGHSGPVYGVSFSSDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSP
FGYYFVSGGHDRVARLWATDHYQPLRIFAGHLADVTCTRFHPNANYVATGSTDRTVRLWD
VLNGNCVRIFTGHKGPIHSLAFSPNGKFLASGATDGRVLLWDIGHGLMIGELKGHTDTIY
ALRFSRDGEILASGSMDNTVRLWDAIKAFDDIEMDDFTAATGHIHLPDNSQELLLGTYHS
KSTPVAHLHFTRRNLLLAAGAYNSQ
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtgcaagacggaacgatcgagttggacaccgagaaagaaacaaagcctgaa
attctcagcgatggatcagtaaagctcgcgggaaacacagggagcggggcactctccacg
ttgccccccgccggcggcggagctccgaagatggaggaccagcaaactttgatcgcggtg
ctgcagtttctgaagcggaataaactgacggagtcggtggatattttgcggcgtgaagct
ggtctgtcggacgaccaggaggactcgcagggtgccgatgctggtggtggagggcttggg
gctggagggaagggtgatggcgatggagtggatgcaaagtctctgctcaaccgtgtgtcc
atcgcatcagcagccgccccccagagcgcccctctacctgcaaaaagtggggaagaccag
ccagatgtgagtgttgtgttgtcagcatacacccagcagggggacccatccctgtataag
gtttactacagtgacctgaagaagttcattgagtcggtcctggactgtcacagggccgag
ctgtcacagctcttctaccctctgtttgttcacatgtacctggagctggtctacaataac
catgagaccgaagctaaggctttctttgaaaagtttagtggtgatcaggaatgctactac
gaggacgacctgcgcgttctctgtggccttacgaagaaagagcacatgaaggggaatgag
gctctgttggacttccgcaccagccgcttcgtgctccggatctcccgggactcctatcag
ctgctaaagagacacctgcaggaacggcaaaataaccagatatggaacatcattcaggag
cacctgtacattgacatttttgacgggatgccacgaagcaagggtcagatcgacagcatg
tctggcagtctagggggggaggctaagcgagaggttaacaaagtaaaggtatattatggg
ctgctaaaggagccagagattgaggtcccacttgacgatgaagacgatgaagcagagaac
gaggaagggaagcccaagaagaagaaagctaagaaggacagtatgggctccaagagcaaa
aagcaagaccccaatgcgcctcagcaaaacaggatacctctgccagagctgaaggattca
gacaagctggataagatcatgtatatgaaagaaagcaccaaacgaatccgactcagccca
gacaacctgccttctgtttgcttttacacattcctcaatgcctaccagggtttgacggca
gtagacttcacagatgactctagtcttctagcgggtgggtttgccgactcgaccgtccgt
gtctggagcgtcacacccaaaaaattacgcaaggtcaaatctgctgcagacctgaatctg
attgataaggagtcagatgatgttcttgagaggatcatggatgaaaagacagccagcgag
tcgaagatcctccacggtcacagtgggccagtgtacggtgtcagcttcagttcagacagg
aactatttgttatccagctctgaggatggtacagtcaggctgtggagtctgcagacgttt
acttgtcttgtgggttacaaaggacataattatcccgtgtgggacactcagttttcaccc
tttggttattatttcgtatctggaggacatgacagagtggcacgcctttgggccacagat
cattaccagccgctgcggatatttgctggccatctagctgacgtcacctgcacacgcttt
catccaaacgctaactatgtggccacgggctccaccgaccgcaccgtgcgcctctgggat
gtactgaatggaaactgcgtccgaattttcacaggacacaagggtcccatccattcttta
gcattctcacccaatggaaagttcctggcatctggtgcaacagacgggagagttctgttg
tgggatatcggacacgggctgatgatcggagagctgaagggacatacagacacaatctat
gccctcaggttcagcagagacggtgaaattctcgcatcaggctctatggataacacagta
cgattatgggatgctataaaggcttttgatgatatagagatggatgatttcactgcagcg
accggacacattcacctgcccgataactcccaagagctcttgctagggacgtaccactca
aaatctacacccgtcgcccacctgcacttcaccagacgtaacctgctccttgctgcaggg
gcgtataactcccagtga
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integrated database retrieval system
