KEGG   Paramisgurnus dabryanus (large-scale loach): 135785891
Entry
135785891         CDS       T10799                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
pdab  Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:pdab00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdab03041]
    135785891
Spliceosome [BR:pdab03041]
 Complex B
  Other components
   Complex B specific factors
    135785891
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR75_1st LisH_TPL ANAPC4_WD40 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_TEP1_C Beta-prop_Vps41 Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_EIPR1 Beta-prop_IP5PC_F PROPPIN Beta-prop_NUP159_NUP214 Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_BBS7 Beta-prop_WDR75_2nd VPS8_N LisH Beta-prop_IFT122_2nd LisH_PAC1 LisH_WDR26 DUF7165
Other DBs
NCBI-GeneID: 135785891
NCBI-ProteinID: XP_065151593
LinkDB
Position
4:complement(429749..482953)
AA seq 539 aa
MDLEVESADVIRLIMQYLKENNLHRTLAMLQEETTVSLHTVDSIDSFITDINSGHWDIVL
LAIQYLKLPDKLLIDLYEQIVLELIELGELGAAHCLLMQTDPMIMLKHTQPERYSHMENL
LNQPYFDAQEAYPAGSSKEKRRQAIAQAFAGEVCLVPPSRLMALLGQGRICEGALYRLQE
TKALRQFGSLAMLSLKWQQHQGLLPPGMSLDLFRGKGALKDMEEEHFPTQLSRLIKFGPK
SHVECARFSPDGQYLITGSVDGFIEVWNFTTGKIRKDLKYQAEDNFMMMDEAVLCLAVSH
ESDMIASGAQDGKIQVWRIMNGQCLRRFERAHSKAVTCVCFNKDSSQLLSASFDQVIRLH
GLKSGKTLKEFRGHTAHVNDVIFSHDGQHVISASADGTVKIWTMKTMDCTCTIKTPDIPE
GMHITVNNVMLIPKTPEHFVVCNRTNTVVVTNIHGQVMRSFCSGVREGADFVCCTLSPRG
EWIYCVGEDYLLYCFSAITGKLERTLTVHEKDVIGITHHPHQNLIATYSEDGLLKLWKP
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggaccttgaagtggaatctgcagacgtgattcgtctgatcatgcagtatctgaaggag
aataatctgcaccgcacactggcgatgcttcaggaggagacgaccgtatctctgcataca
gtggacagcattgacagcttcatcacagacatcaacagcggacactgggatattgtgttg
ctcgcaatccagtatctgaaacttcccgacaagctgctcattgatctctatgaacagatt
gtgctggagttgattgagttgggggaactgggggctgcccattgtttacttatgcaaacg
gatcccatgatcatgttaaagcacacacaacctgagcgctactcacacatggagaatctt
ctcaaccagccttactttgacgcacaagaggcatatccagcgggcagtagcaaagagaaa
cgcagacaggccatcgctcaagcttttgctggagaagtttgtttggtgccaccgtctcgc
ctcatggctctgctgggccagggccgtatatgtgagggggctctttacagattgcaagag
accaaagcactaaggcagtttgggtcattagcaatgctgtctttaaagtggcaacaacac
cagggacttttacctccgggtatgtcattggatctgttccgcggcaaaggtgcattaaag
gacatggaggaagagcatttccctacacagctgagtcgccttataaagtttgggccaaag
tctcatgtagagtgtgctcggttctctcctgatggacaataccttatcactggttctgtt
gatggtttcattgaggtctggaacttcaccactggtaaaattaggaaggacctgaagtac
caagccgaagacaatttcatgatgatggatgaggccgttctgtgtctggcagtaagtcat
gaatcagacatgatcgcctctggagctcaagatggaaagatacaggtatggaggattatg
aatggccagtgcctgcggaggtttgagcgagctcacagcaaagctgtaacctgtgtctgc
ttcaacaaggacagcagtcaactgctaagtgcctcctttgaccaagtcatcagacttcat
ggcttgaaatcaggaaagacattgaaggagtttagaggtcacactgctcatgtaaatgat
gttatcttctcacacgatggccagcatgtcattagtgcatcagcagatggaacagtaaag
atttggaccatgaagacaatggactgcacctgcacaattaaaacccccgatattcctgag
ggtatgcacatcactgttaacaatgttatgctcatcccgaaaactcctgagcattttgtg
gtgtgtaacaggaccaacacggttgtagttacgaacattcatggccaggtaatgagaagt
ttctgttcaggcgtgagagagggggcagactttgtctgctgcacgttgtctccgcgtgga
gagtggatatattgcgtgggagaagactatctgctgtactgctttagcgccatcactggc
aaactagagagaaccctcacggtacatgaaaaagatgtgattggcataactcaccacccc
catcaaaatcttattgccacatacagtgaggatggtctgctcaaactctggaagccctga

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