Paramisgurnus dabryanus (large-scale loach): 135786287
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Entry
135786287 CDS
T10799
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
135786287 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdab04040
]
135786287 (cnga1a)
Ion channels [BR:
pdab04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
135786287 (cnga1a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
NPR3
Sec62
BUD22
PFF1_TM
Motif
Other DBs
NCBI-GeneID:
135786287
NCBI-ProteinID:
XP_065152001
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All DBs
Position
4:16729640..16734981
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AA seq
694 aa
AA seq
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MPVVPTLGGVAVPSQMSPIMEVDTEEDQEDLIPAPNAGRFFNINNSNNNDEEEKKNKKKK
EKKEKKEKKDKKEKKEKKQKKQMKLKEEKEKENEKEKEKEKEKEKEKVKEEGPKEVFVIN
PAGLLYYQWLFIITIPVMYNWTVIIARACFEELQHDYILIWFFLDYTSDLLYLADMAFRA
RTGYLEQGLLVKDEKLLLQRYTDSFQFRIDVVSMLPTDIFYFVLGLDYPEIRINKLLRLN
RMFEFFKISETMTNYPNIFRICTLVMYIIIIIHWNACLYFSFSKSIGFGSDPWVYPALTE
PEFDQLLRKYSFSLYWSTLTLTTIGETPSPELDSEFFFHVVDFLVGVLIFATIVGNIATM
ISNMNAAQAQFQARIDNIKQYMHARHVSKDLENRVIKWFDYLWNNKKAQDEREVLRYLPD
KLRAEIGMNVHLDTLKKVRIFADCEAGLLIELVLKLQPQVFSPGDYICRKGDIGREMYII
KDGKLAVVADDGVTQFCVLGDGSYFGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKD
DLMEALTEYPDAKAMLEDKGREILLKDGLLELDPTKLKPDERDLEYRVNRIYSTLQIMQT
KVMKLIAEHAETNKNIKKQIVEIERYAGEEVEDEDEEEEKTEKAIQEEATKEEKMEDETE
EKKEGDPEKQRSDKDKEMTGEVTKEEKEEKDWEP
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgtacctacattaggaggtgttgcagtaccatcccaaatgtctccgataatg
gaggtggacacagaggaggatcaggaagacctgattcctgctccaaatgcaggacgtttt
tttaacatcaacaacagcaacaacaatgatgaggaagaaaagaagaacaagaagaaaaag
gagaaaaaagagaagaaggagaagaaagacaaaaaagaaaagaaagagaagaagcagaaa
aagcagatgaaactgaaagaagagaaggagaaagaaaatgaaaaagaaaaagagaaggag
aaggaaaaagaaaaggaaaaagttaaagaggaggggcctaaagaggtgtttgtgattaac
ccagcgggacttctgtattatcaatggctgtttataatcaccattcctgtcatgtataat
tggacagttatcattgcaagagcctgttttgaggaactgcaacatgattatatactgata
tggttcttcttggactacacctctgacctgctttacttagctgacatggccttcagagct
cgaacaggttacctggaacaaggcttgcttgtcaaagatgaaaagctcctgcttcagcgg
tacacagacagcttccagttccgcatcgacgtggtctccatgttacccacagacatcttc
tactttgttttagggctagactaccccgagatccgcattaacaagctgcttcgcctgaac
cgcatgtttgagttcttcaaaatctcagaaacgatgaccaactaccccaacattttccgg
atctgcaccttggtcatgtacataatcatcattatccactggaacgcgtgcctctacttt
tccttctctaagtccattgggtttggatcagatccatgggtgtatcccgctctcactgaa
ccggagtttgaccagctgttacgaaaatattccttcagcctgtactggtccacacttacc
cttaccaccattggagagacgccttcacccgagcttgactctgaattcttctttcatgtg
gttgacttcctggtgggcgtcctgatttttgccaccattgtgggcaatattgccaccatg
atctccaacatgaacgctgcccaggcacagtttcaggcacggattgacaacattaaacaa
tacatgcatgcgcgccacgtcagtaaagacttggagaatcgtgtcatcaagtggtttgac
tacctgtggaataacaagaaggcacaagatgaaagagaagtcttgaggtacctaccagac
aagttacgggcagagataggcatgaatgtgcacttggatacgctcaagaaggtacggatc
tttgcggattgcgaggctggtttgttaatagagttggtgctgaagcttcagcctcaggtc
ttcagtcctggtgactacatctgtcgcaagggtgatatcggacgtgagatgtacatcata
aaggatggcaagcttgctgtggtggctgatgacggcgtcactcagttttgcgttcttgga
gacgggagctacttcggtgaaatcagcattctgaacataaagggcagcaaagctggaaat
cgtagaacggccaatattcgaagcattgggtactcagatctcttctgtctgtccaaggat
gatctgatggaagctctaacggaatatcctgatgctaaggctatgttggaggataaaggg
agagagattctgctgaaggatggtctgctggagttggaccctacaaaactgaaaccggat
gagagggacttggagtaccgcgtgaaccggatctacagcacgctgcagatcatgcagacc
aaagtgatgaagctgatagcagaacacgcagagacaaataaaaacatcaaaaaacagatt
gtagagatagagcggtatgccggggaagaggtagaggatgaagatgaagaggaggaaaag
acagaaaaagcgatacaagaggaggccacaaaggaggagaagatggaagatgagacagag
gaaaagaaagaaggagatccagaaaaacagaggtcagataaagataaggaaatgacggga
gaagtgacgaaggaggaaaaggaggaaaaagattgggaaccgtaa
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