Paramisgurnus dabryanus (large-scale loach): 135786494
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Entry
135786494 CDS
T10799
Symbol
ldb3a
Name
(RefSeq) LIM domain-binding protein 3a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
135786494 (ldb3a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
135786494 (ldb3a)
Domain-containing proteins not elsewhere classified [BR:
pdab04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
135786494 (ldb3a)
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GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
PDZ_2
LIM_FHL2-3_N
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
135786494
NCBI-ProteinID:
XP_073669026
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All DBs
Position
20:complement(18834473..18888677)
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AA seq
569 aa
AA seq
DB search
MSSYNVSLAGPSPWGFRLQGGKDFNMPLTVSKVTPGSKAASSNLNLGDIIVAIDGVSTEG
MTHLEAQNKIKSAKFNLGLTMQKSKRPIPVSMSIPKMNSPMPMIAHQKVISNTPANNEYV
PSFNPIALKDTAVSTHKPIEVKGPGGKATIIHAQYNTPISMYSQDAIMDAIAGQSQARGG
DVPGTEALTDPSQSFGMQTSSGYQSHYKTAISSSYTQQHPHVQPPPMQQPMHMQQPMHMQ
QPLHMQQPPPMQHSSIQIPVGPPPPKVVSTATIVPTAYHAAPAPAPSMVHKPAPAPPAPA
PASGSSSNRPPWVTDDSFAHKFDPSKQTTTTIKVQPLPQAAPPPPAYIPNPVHSSAPAPA
PAAPFNPAPFLPVARGVAQRAERFAASNRTPLCGACNSVIRGPFLVALGRSWHPEEFNCH
YCHTSLADVSFVEEQNNVYCENCYGEFFAPTCARCNTKIMGEVMHALRQTWHTTCFVCAA
CGKPFGNSLFHMEDGEPYCEKDYIALFSTKCHGCDFPVEAGDKFIEALGHTWHDTCFVCA
VCHVNLEGQPFYSKKDKPLCKKHAHAINV
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttacaacgtgtcactcgctggaccttcgccatggggtttccggttgcaagga
ggcaaggacttcaacatgcctctcaccgtttctaaggttacacctggaagcaaggcagcg
tcaagcaacctgaatctgggtgacatcatcgtggctatcgatggggtcagcacagagggg
atgacacacctggaggcccaaaacaagatcaagtctgccaagtttaatctgggcctcacc
atgcaaaagtcaaagcgccccatcccagtatccatgtctataccaaagatgaactcccct
atgcctatgatcgcccatcagaaggtcatttccaacactcctgccaacaatgagtatgtg
cccagcttcaaccccatagctctgaaggacactgctgtctccacccacaagcccattgag
gtgaaggggcctggaggcaaggccaccatcatccatgcccagtacaacactcctatcagc
atgtactcccaggatgctatcatggatgcaattgctggtcagtcccaggccagaggtggc
gatgtgcctggcaccgaagcgcttactgacccttcccaatccttcggcatgcagacttct
agcggttaccaatcccactacaaaactgccatctccagttcctacacccagcagcatcca
catgtgcagcccccacccatgcagcagccaatgcacatgcagcagccaatgcacatgcag
cagccactgcacatgcagcagccaccacccatgcagcacagctccatccagatccctgta
ggcccacctccacctaaagtggtcagcactgccaccattgtacccacagcttatcatgcc
gccccagctccagctccatcaatggttcacaagcctgctcctgctccacctgcacctgct
ccagcttcaggctcttcttccaacagacccccttgggttactgatgatagttttgcccat
aaatttgaccctagcaaacaaaccacaacaactattaaagtgcagcctcttccccaggct
gccccaccccctccagcctacatccctaatcccgtccattcttctgctccggctcctgct
ccagctgcaccctttaaccctgcccccttcctacctgttgcccgtggagttgctcagagg
gcggagcggtttgcagccagcaacagaacacctctgtgtggagcctgcaacagcgtcatc
agaggacccttcctggtagcactgggtcgctcttggcatccagaggagttcaactgccat
tattgccacacgtctctggctgatgtcagctttgtggaagagcagaacaatgtttactgt
gagaactgctatggagagttctttgcacctacctgtgctcgctgcaacaccaagatcatg
ggagaagtgatgcatgcactgagacagacctggcataccacttgttttgtatgcgctgct
tgtggaaagccctttggaaacagcctcttccatatggaggatggggaaccctattgtgag
aaagattacattgctctcttcagcacaaaatgccatggatgtgacttcccagttgaggca
ggagacaaattcatcgaagctcttggccatacatggcatgatacttgctttgtttgtgcg
gtgtgccatgtgaacctggaaggacaacctttctactccaagaaggacaagcctttatgc
aagaagcatgcccatgccatcaatgtgtag
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