Paramisgurnus dabryanus (large-scale loach): 135786594
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Entry
135786594 CDS
T10799
Symbol
polr1b
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
135786594 (polr1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdab03021
]
135786594 (polr1b)
Enzymes [BR:
pdab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
135786594 (polr1b)
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
135786594 (polr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpa2_4
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
DUF1186
Motif
Other DBs
NCBI-GeneID:
135786594
NCBI-ProteinID:
XP_065152142
LinkDB
All DBs
Position
20:4091026..4100557
Genome browser
AA seq
1132 aa
AA seq
DB search
MDLSKWCNLLSDPSLKHLTEAGFGVPKEKQHVPVQELVKAHIESFDQAVTDGLCRVVGAI
PPLEFMYREDRISLSFVEAVIHPPAVSKGGISRDLRVFPAECRGRRCTYRGKLVADVSWS
VNGVPKGIIKQSLGQVPIMVKSKLCNLHGLSPKELIEHHEEAEEMGGYFIVNGIEKVIRL
LIMPRRNYPIAMIRPKFKSRGQGYTQYGISMHCVKDEHTAINMNLHYLDNGTVMLNFIYR
KELFFLPLGFALKALVDFSDFQIYQELIKGREENSFYKSCVSEMLRVVMEEGCTTKDKVL
NYLGERFRVKLNLPDWFTHKQCANFLLDECLCIHLKSDVEKFYMLCLMTRKLFSFAKQEC
MEENPDSLMCQEVLTPGQLYLMFMKEKMAGWLVSVKLALDKRSKRLGVLTADSVTKVFNM
GTDLTKAFEYMLATGNLQSKTGLGMLQDTGLCVVADKLNFIRYLSHFRCVHRGAAFAKMR
TTSVRKLLPESWGFVCPVHTPDGEPCGLMNHLTAHCEIVAPVYPTSTLPALLCSLGVTTA
DGTPSQPYSDCYPVILDGAMIGWVEREMAPSVVESLRRFKVLGEKKVPPWTEIVLVPQTG
KASMYPGLYLFTTPCRMVRPVRNLALGKQELIGTFEQVYLNVGIFEEELEKGVSTHQELF
PHSMLSVVADFIPFSDHNQSPRNMYQCQMSKQTMGFPLHSYQDRADSKLYRLQTPQSPLV
RPAMYDHYNMDNYPIGTNAIVAVISYTGYDMEDAMIVNKSSWERGFAHGSVYKTELIDLS
EKYKGEESIVFGVKPDDPKVMNRLDTDGLPFIGSVLKYGDPFYSCINLNTGRSYVTFYKN
QEDCVVDNIKVCSNDSGTGRFKRVCISVRVPRNPTIGDKFASRHGQKGILSRLWPTEDMP
FTESGMTPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFKFSEEHSALEHFG
EMLKAAGYNYYGTERLYSGLSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGSRDKVTN
QPLGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAQVCVDCGSMLSPLLEK
PPPHWSATRHRNTICLLCNKNDSIETVSVPYVFRYFVAELAAMNIKIKLDVK
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggatctctcgaaatggtgcaatttattgtcggatccgagtttaaagcatttgacagag
gcagggtttggtgtgcctaaagagaaacagcacgtgccggtgcaagagctggtaaaagcg
cacattgagtcatttgatcaggcagttactgatggattgtgtcgagttgtgggggctatt
cctccactggagttcatgtacagggaagacaggatcagtctgtcgtttgttgaggctgtg
attcaccccccagcagtttctaaagggggaatcagcagagatctgcgggtctttcctgct
gaatgcagaggcagacgatgtacatacagaggaaagctggtggcggatgtgagttggtct
gtaaatggagttcctaagggaatcatcaagcagtctctgggtcaggtgcctatcatggtc
aaatccaaactttgcaaccttcacggtctctcgcccaaagaactcatcgagcatcacgag
gaagccgaggaaatgggcggttattttatcgtgaatggcatcgagaaagtgattcgtctg
ctgatcatgccgaggagaaactatcccatcgccatgataagaccgaaatttaagagcaga
ggacagggctacacgcagtatggtatttcaatgcattgtgtaaaggacgaacacacagcc
attaatatgaatcttcactacctggataatggaacagtcatgctgaatttcatttaccgg
aaagagttgttttttcttcccttgggctttgcgctaaaggctctggtggacttctcagat
ttccagatctatcaggagctgattaaaggtcgagaggagaactctttctataagagctgt
gtttctgaaatgctgcgtgtggttatggaggaaggctgcacaactaaagacaaggtgctg
aattacctgggcgagcgttttcgggtcaaactgaacctccctgattggtttactcacaag
cagtgtgccaactttctattagacgaatgcttgtgtattcacctgaagtcagacgtggag
aagttttacatgttgtgtcttatgacaaggaagctcttcagctttgccaagcaggagtgt
atggaggaaaatccagacagtttgatgtgtcaggaagtcctcacacctgggcagctctac
ctcatgttcatgaaagagaagatggcggggtggctggtctctgtgaaactggccctcgac
aagagaagtaagagacttggagtactgactgcagatagtgtgactaaagtcttcaacatg
ggtacagatctcaccaaagcttttgagtatatgttagcaaccggaaacctccagtcaaag
acgggtctgggcatgctccaggatacaggactgtgtgtcgtggcggacaagctgaatttt
atccggtatctgtctcattttcgctgcgtgcacagaggagccgctttcgccaagatgaga
accacgtctgtgcgaaaacttctgccggagtcctggggtttcgtgtgccccgtacacacg
cccgacggagagccgtgcggtctcatgaatcacttgactgcccactgtgagatcgtagcc
ccagtgtatcccaccagcaccctgccggccctgctctgctctctgggtgtgactacagca
gatgggaccccgagtcagccgtactctgattgttatcctgttatactggatggagccatg
atcggctgggtggagagagagatggcaccgtctgttgtcgagtctctccgcaggtttaaa
gtgctgggagagaagaaggtgccaccctggactgagatcgttttagttcctcagacgggt
aaagccagcatgtatcccggcctctatctgtttacaacgccctgtcgcatggtgcggccc
gtccgaaacctcgccctgggcaaacaggagctcattggcacctttgaacaggtgtacctc
aatgtgggaatctttgaggaggaacttgagaaaggagtaagcacacatcaagagttgttt
cctcacagtatgttaagcgtggtggcagatttcatcccgttctccgaccacaaccagagt
cccagaaacatgtaccagtgccagatgagtaaacagaccatgggcttcccgttgcactcg
taccaggaccgtgccgacagtaagctttatcgtctccagacccctcagagtccgttggtc
agacctgcgatgtatgaccactacaacatggacaattatcccatcggcaccaatgcgatc
gtggccgttatttcatacaccggctacgatatggaggatgctatgattgtaaataaatcc
tcgtgggagcgtggctttgctcacggttcggtttataagactgaactcatagatctgtct
gagaagtacaaaggtgaggaaagcattgtatttggggtcaagccagatgatccaaaagtg
atgaatcgactggatacagacggactgccgtttataggctcggtgctgaagtatggagac
cctttctatagctgcatcaatctcaataccggcaggagttacgtgaccttttacaagaac
caagaagattgcgtggtggacaatatcaaagtatgcagcaatgactctggaacaggccgc
tttaagcgtgtgtgcatctcagtccgcgttcccaggaaccctacgattggagacaagttt
gccagtagacacggccagaagggaatcctgagtcggctatggcctacggaggatatgccc
tttactgaaagcggcatgacccccgatatcttgttcaaccctcacggatttccttccaga
atgaccatcggaatgctcatcgagagcatggccggaaaatcggcggccctgcacggcctg
tgtcacgacgccacgcccttcaaattctctgaggaacactctgcgctggagcatttcggc
gagatgctgaaggcggcggggtacaactactacggtacagagcggttgtactccggattg
agcggtttggagctcgaggcggacatattcatcggtgtggtttactatcaacgtctgcgg
cacatggtttctgacaagttccaggtgagaactacaggatccagagacaaagtcacgaat
cagccgctgggagggaggaacgtgcagggaggaatccggttcggagaaatggaacgggat
gctttgctggcccacgggacgtcattcctgctacacgaccggctgtttaactgctctgat
cggtccgtggcacaggtttgcgtggactgcggcagcatgctgtccccactcctggaaaag
ccgccacctcattggtcggccacacggcatagaaacaccatctgtctgctgtgcaataag
aacgactccatcgagactgtgtccgtaccgtatgtgttcagatattttgtagcggagctt
gcggcaatgaacattaaaatcaaattagatgtcaagtaa
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