Paramisgurnus dabryanus (large-scale loach): 135786614
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Entry
135786614 CDS
T10799
Symbol
capn1a
Name
(RefSeq) calpain 1, (mu/I) large subunit a isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04141
Protein processing in endoplasmic reticulum
pdab04210
Apoptosis
pdab04217
Necroptosis
pdab04218
Cellular senescence
pdab04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135786614 (capn1a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
135786614 (capn1a)
04217 Necroptosis
135786614 (capn1a)
04218 Cellular senescence
135786614 (capn1a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
135786614 (capn1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pdab01002
]
135786614 (capn1a)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
135786614 (capn1a)
Peptidases and inhibitors [BR:
pdab01002
]
Cysteine peptidases
Family C2: calpain family
135786614 (capn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
135786614
NCBI-ProteinID:
XP_065152173
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All DBs
Position
20:complement(4543248..4562888)
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AA seq
704 aa
AA seq
DB search
MCSYGGISAHISANRLRAEGRGSFEQAIHFQNQDYEALRQECLEGGYLFEDPCFPAEPPS
LGFKELAPYSSKTRDVVWMRPTEFCDDPQFILGGATRTDICQGALGDCWLLAAIASLTLN
EQLLHRVVPHGQSFQDGYAGIFHFQFWQFGEWVDIVIDDRLPVKDGELMFVHSAEGNEFW
SALVEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPKDLYRIIGKALERGSL
LGCSIDITSSFDMEAVTFKKLVKGHAYSVTALKQVEYRGHSERLIRIRNPWGQVEWTGAW
SDNSPEWDEIDPSEKDDLHLQMEDGEFWMSFSEFLRQYSRLEICNLSPDALSNDEMSHWN
TIKFHGTWRRGSTAGGCRNHPNTFWINPQYKITLMEEDDDPEDEEVACSFLVALMQKDRR
RYRRQGQDMHTIGFAIYEIPEEYAGCQNVHLKKDFFLAHSSCARSETFINLREVSTRLRL
PPGEYIVVPSTFEPSKEADFVLRVFTEKQSQTEELDDEISADLEDEEEISEDDIDDSFKA
MFAQLAGEDMEISVRELKTILNRVVSRHKDIKTDGFSMESCRTMVNLLDKDGSARLGLVE
FQILWNKIRKLLGIFREFDIDKSGNMSSYEMRLAVESAGFKLNNRLHQILVARYAENEVV
DFDNFICCMIKLECMFKSFQLLDREGTGEAEMNLSEWLFMAMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcctatggaggaatctcagcacacatcagtgctaacaggctgagagcagagggc
aggggctctttcgagcaggccatacatttccagaaccaggattatgaagccctcagacag
gagtgtttggaaggaggttacctgtttgaagatccatgctttcccgctgagcctccgtct
cttggcttcaaagaacttgcaccgtattcatccaaaacccgggatgtggtgtggatgcgt
ccaacggagttctgtgatgatccacagtttattttgggcggagctacgaggacagacatc
tgtcagggagctctgggtgactgttggcttctggctgctatagcttcactcactcttaat
gaacagcttttacacagagttgttcctcatggacagagttttcaggacggatatgctggg
attttccactttcagttctggcagtttggcgagtgggtggacattgtgattgacgatcga
ctgccagtcaaagatggagagctcatgtttgtccactcagcagagggaaatgaattctgg
agtgccttggttgaaaaagcctatgctaagttaaatggctcctatgaagctctttctgga
ggttccaccacggagggttttgaggatttcaccggtggggtctccgagatgtacgagctc
cggaaagctccgaaagatctctacagaatcatcggcaaagccctggagcgaggctcactg
ctgggctgctccattgatatcaccagttccttcgacatggaagcggtgacttttaagaag
ctcgtcaagggtcatgcttactctgtgactgctctcaaacaggtggagtataggggccat
tcagagaggctcatccgtatccgtaacccttggggtcaggtggaatggacaggcgcctgg
agtgacaactcccctgaatgggatgagatagatccgtctgagaaagatgatctgcattta
cagatggaggacggagagttttggatgtcgtttagtgagtttttgcggcagtattccagg
ttggagatctgtaatctgtctcctgatgccctgagcaatgatgaaatgagccactggaac
accatcaagtttcacggcacctggaggagaggaagcactgcaggaggctgtcgaaatcat
cccaacacattctggattaatccgcagtataaaatcactctaatggaggaagacgatgat
ccagaggacgaagaggtggcctgcagtttcctggtggctttaatgcagaaagaccgcaga
cgctatcgtcggcaagggcaggacatgcacaccatcggctttgcgatctatgagattcct
gaagagtacgcaggttgtcagaacgtgcatcttaaaaaggacttcttcttggcacactct
tcgtgcgctcgatcagagacctttattaacctgcgagaggtgagcactcgtctccgcctg
ccgcctggtgaatacatcgtcgttccctccaccttcgagcccagcaaagaggcggacttt
gtcctacgggtctttacagaaaaacagtcacagactgaggagttggatgatgagatttca
gcagacttggaggatgaagaggaaatttcagaggatgatatcgatgactcttttaaggca
atgtttgctcaactggctggagaggatatggagatatctgttcgtgaactaaagaccatt
ctgaatcgagtcgtgtccagacacaaggacatcaagacagatgggttcagcatggagtcc
tgtagaactatggtcaaccttttggacaaagatggaagtgccaggttgggattagtagag
tttcagatcctctggaacaaaattagaaagttgctggggatcttcagagaatttgacatt
gataaatcagggaatatgagctcctatgagatgcgtcttgcagtggaatcagcaggcttc
aagcttaacaacagactgcaccagattctagtagccagatacgcggagaacgaagtcgtc
gattttgataacttcatctgttgcatgatcaaactggagtgcatgttcaaatctttccag
ctgttggacagagagggaaccggagaggcggagatgaacttatcagagtggctcttcatg
gcgatgtgcggttga
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