Paramisgurnus dabryanus (large-scale loach): 135786779
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Entry
135786779 CDS
T10799
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03040
Spliceosome
pdab05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
135786779 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
135786779 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdab03041
]
135786779 (srsf5a)
Spliceosome [BR:
pdab03041
]
Common components
Common spliceosomal components
SR proteins
135786779 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
135786779
NCBI-ProteinID:
XP_065152420
LinkDB
All DBs
Position
20:10292860..10297009
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AA seq
266 aa
AA seq
DB search
MSGCRVFIGRLSPHARERDVEKFFKGYGRIREINLKNGFGFVEFDDHRDADDAVYELNGK
ELCSERVTIEHARSRRGRGGGPGMGGGRFSPRFGGYRQSRSGGSRYGPPVRTEHRIIVEN
LSSRISWQDLKDLMRKVGEVTFVDAHRSKKNEGVVEFASHSDMKSAIEKLDGTELNGRKI
KLFEDRKRGGSRSRSRSRSRSSSRSRSRSRSRSAERGSKRSHSRSPSRTPEKKSNNRSPS
RSRSPSPAPRNQSRSRSRSASAESQH
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgagtggatgtcgcgttttcatcggccgtctgagcccccatgcgcgtgaaagagacgtg
gagaagttctttaagggctatggacgcatccgggagataaacctgaagaacggctttggc
tttgtggagtttgatgaccacagagatgcagatgatgcagtttatgagctaaatggaaaa
gaactgtgcagtgagagagtgacaattgagcacgcccgctctcgtcgcggaagaggtggt
ggcccaggaatgggaggtggacgcttctctccacgcttcggaggctatcgccagtctcgc
agtgggggttccaggtatggcccaccagtgcgcactgaacaccgaatcattgtggagaat
ctgtcatcacgaatcagttggcaggatctgaaggacttgatgaggaaagtcggagaagtg
acttttgtggatgcacacaggagcaaaaagaatgagggggtggttgagtttgcttctcac
agtgacatgaagagcgccattgaaaagctggacgggacggaacttaacggtcgcaagatc
aagctgttcgaggatcgcaagagaggaggcagtcggagcagaagtcgttctcgcagcaga
agcagctcacgctctcgttctcgcagtcggagtcgcagcgcagagcgtggaagcaaacgc
tcccacagccgctcgcccagtcgcactccagaaaagaagtccaacaaccgttcaccctcc
cgctcgcgttcaccctctcccgctccaagaaatcagagcaggagcagatcccggtctgcc
tctgcagagagtcagcactga
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