Paramisgurnus dabryanus (large-scale loach): 135786845
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Entry
135786845 CDS
T10799
Symbol
brf1a
Name
(RefSeq) BRF1 general transcription factor IIIB subunit a
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdab03021
]
135786845 (brf1a)
Transcription machinery [BR:
pdab03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
135786845 (brf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
135786845
NCBI-ProteinID:
XP_065152512
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All DBs
Position
20:complement(12407825..12450314)
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AA seq
668 aa
AA seq
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MGKCKNCGCTDIDVDQARGVAVCMGCGSVLEDNIIVSEVTFVESGGGGSSAVGQFVAGDS
SGNVPQLGTNFHTGVGRESRAATLQNAKRQIIHLGHQLQMNQHCLDTAFNFYKMALCKQL
TRGRKSAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLVLARELCINAPAID
PCLYIPRFTQMLEFGEKSHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMHDF
RRTIKEVISVVKVCEATLRKRLNEFEDTPTSELTIEEFMKVDLEQECDPPSFTAGLRKQK
LKQIEQELAKKVDDIEGEICGYQDEIEIELESCRPKPRGIYASSSREDDVISLASSSLLV
GDDGEDEELRAAASHLCKDSGFVEMDAGGDERKHDKVTPSKRPSLELLLGTLPTAASLGL
PESITKMREEKENDAESEDGELDLSGIDEDEIDRYILNEKEIKVKTELWMIQNADYLKEQ
KEKEERIAKEKEEGTYKERKTRKPGKRREPINASTADEAIEKMLERKRISTKINYDVLKD
LNKSNPKSPTRQSEEPSDGLKRTPASRQPKPHLSSPKMSKTVSSFGKRLQPLICPQPSKK
VALDQNGSGLPLAAPVQNAVVVESGPVSYEDPTGEEEEDEEEEPCISAMDLMGRGGDYGF
ELDDDDGF
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtgtaagaattgtgggtgcacagacattgatgtggaccaggcacggggagtt
gctgtttgcatgggctgtggctctgtgcttgaggacaacatcatcgtttcagaggtaacc
ttcgtggaaagcggcggtggaggatcatctgctgttgggcagtttgtcgctggtgactcg
tctggaaatgtgccacaattgggaacaaacttccacaccggggtggggagggagtccaga
gctgccactctgcaaaatgctaagcggcagattatccacctcggtcatcagctccagatg
aatcagcactgtctggacacagccttcaacttttacaagatggcactttgcaaacaactg
actagagggcgaaaatcagcccatgtcattgccgcctgtctctacctcgtctgccgtacg
gaggggacacctcacatgctgctcgacttgagtgacctactgcaggttaacgtgtatatt
ttggggaaaaccttccttgttttagctagggagctgtgcatcaatgcacctgctattgat
ccgtgtctttacattccgcgttttacgcaaatgctggaatttggggagaagagtcacgag
gtttcgatgacggcattgcgtctcttgcagaggatgaagagagactggatgcacacggga
cggagaccttcgggcctctgcggagcagctctcttggttgccgctcgcatgcacgatttc
cgtcgaacaattaaagaagtgataagtgtggtgaaagtgtgtgaggctacattgagaaaa
aggctgaatgagtttgaagacacgcccaccagtgagctcaccattgaggagttcatgaag
gtggacctggagcaggagtgtgacccaccctcattcacggctggactcaggaagcaaaaa
ctaaaacagattgagcaggaacttgcaaagaaagtcgatgatattgaaggtgaaatctgt
gggtatcaggatgagattgaaatagagctggaaagctgtaggcccaaacccagagggatt
tatgcatcctcttctagagaagatgatgtcatatccttagcatcctctagtcttcttgtt
ggtgatgatggagaagacgaagagcttagggcggcagcatctcacctgtgcaaagattca
ggttttgttgaaatggatgcaggtggagatgagcggaagcatgacaaagttaccccatcc
aaacggccgtcgttggaattattgcttgggacgctgcccactgctgccagtttgggcctg
cctgagtctataaccaaaatgagagaggaaaaagaaaacgatgcagagagcgaagatggt
gagctagaccttagcggtatcgacgaagatgagatcgatcggtacatcctaaatgagaag
gaaataaaggtaaagaccgagctgtggatgattcaaaacgcagactacctcaaagaacag
aaagaaaaggaagaaagaatagcaaaggaaaaggaggaaggtacatataaagaacggaag
acaagaaagccagggaagaggcgtgagccgattaacgccagcactgcagacgaggccatt
gagaagatgttagaacggaaacgcatttctactaaaataaactacgatgttctgaaagac
ttgaataaatcaaacccaaaaagtcccactcgccagtcagaagaaccttccgatgggttg
aaaagaacccccgcgagccgccagccgaaaccccatctgtcttcaccgaagatgagcaaa
accgtcagcagttttggcaagaggttacagcccttgatatgtccgcagccctctaagaag
gtggctcttgaccagaatggttctggccttccattggccgcccctgtccagaatgctgtt
gttgtggaaagcggaccggtttcatatgaagatcctacaggtgaagaagaggaggatgaa
gaggaggaaccttgcatcagtgccatggatttaatgggtcgtggtggtgattacgggttc
gaattagacgatgatgatggattttaa
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