Paramisgurnus dabryanus (large-scale loach): 135786916
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Entry
135786916 CDS
T10799
Symbol
rrp12
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pdab03009
]
135786916 (rrp12)
Ribosome biogenesis [BR:
pdab03009
]
Eukaryotic type
90S particles
Other 90S particles
135786916 (rrp12)
Pre-60S particles
Other pre-60S particles
135786916 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
Motif
Other DBs
NCBI-GeneID:
135786916
NCBI-ProteinID:
XP_065152601
LinkDB
All DBs
Position
20:13677240..13692665
Genome browser
AA seq
1281 aa
AA seq
DB search
MVKSGKLRSGAGQKLKRWKKGHSSDSNPETSRYRNAARSRFFSRPSEKSDLTVDALKLHN
DLQAGCLERSSDGAGDAMEEPALTEKTSGTFLSGLSDCSNLTFRKVQRYWESNSAAHKEI
CAVLAAVTEVIRSQGGKETETEYFAALMTTLEAVDSSESLAAVAYLLNLVMKRVPPAVLK
KKFSETAKAFMDVMSNQASSESVSCLRWILSCLATLLRKQDLSVWSYPSTLQVYHGLLSF
TVHSKPKIRKAAQQGVCSILRGSDVMFSDDAPSHHPAAVTTAKFCCKEMEQSGGNKEDTT
TLHVLGLLKELLSTFPLSSVKSCCETLLRVMTLSHVLVTAGAMQAFHKLFSSKPGPSSMS
AELNAQIITALYDYVPSENDLQPLLAWLAVMEKAHIHLSSLQSSLSLGHLPRLFTITMSC
LLSQHSQVVSAATQTLKNLINECVAPHSTEIGPVLPSTTTGNAAYVLKMFHIVEEGLSYR
FHASWPFVLQILGCFYRAAGKQAHSIMIKSLQSLSDLRATPRFPFSGELDLAVGGAVESM
GPEVVLKAVPLLITGTDDDLEFPRSWLIPVIRDHVKNTQLSYFTSYFLPLASKLKQTAEE
LEQSGQKLMAKVYQTLQLQIWTMLPGFCTKPTDLASFKNIARSLGMALSERPDLRLCICQ
ALRALINKSCETEEEKAEVSRFAKNFLPILFNVYSHQPSPGEVASARMAVLDTIRVYLTI
TEEKMVWTFLQKASERLDSKDSSEFTRLAVMDLIVAMAPFVNKASMKQTYELIKPYLESK
DSGIQKKAYRVLEEMCGGEREPCKAFVLGNLEQLKKTLLDSLKTAASPAKRPRLKCLIHI
VKQINEEHKDFIITLLPEVIVCTKEMSIGARKNAYTLLVEIGKAFERFCGNTKDAVNEYL
GHMYVGLIGSVTMITCTVLALTRLVFHYKDSIDVSSLEQLLHNICLLLTSRTREIVKASM
GFLKVLLFVLDVKVLAGQMTVIMEGISNMRDDMRRHFRIKLKSIYTKLVRKFGFELVKSM
LPVEHHKVLANIRKVEARSKRRKMLDKTDEDGSDSEEETSNVKGESIEDILAETDESDSE
DEKPKKGQKKQVKKKGQAWLKEGISDEPLNFLDPKAAQRVLATNPALKKTAKVEHGFKVT
SDGRLIIKDEDDDEGDKAKDTEMDDILEEAGVKTKKNQKRKMQDDDLDDNMDIEPTMKYK
AGGVGIHRPLGEVGTEYKSKKGRGDVKKKGKVDPYAYIPLKKSQLNRRKKAKLQGQFKGM
VRGAKKGALSGKRTLQKKRKA
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatccggaaaacttcgatccggagcggggcagaaattaaagcggtggaagaaa
ggacacagcagcgactcaaatccagaaacaagtcgttacagaaacgcagcgagaagtcgg
tttttcagccgaccctctgagaagagtgatcttacagtagatgctcttaaactccataat
gaccttcaggcagggtgtttggaaagaagcagtgatggggcaggagatgccatggaggag
cctgcactcacagagaaaacatcaggtacttttctcagcggactgtcggactgttccaac
ctgacgtttaggaaagtacagcgatactgggagtcaaactctgcagcacataaagagatc
tgcgctgtattggcagctgtcacagaagtgattcgatctcaaggaggaaaggaaacggag
acagaatactttgcggccctgatgacaacccttgaagctgtggatagcagcgaatcacta
gcagctgttgcctaccttctcaacctggtcatgaaaagggtacctcctgcagtgctaaag
aaaaagttttcagagacagccaaggcctttatggatgtgatgtcgaatcaagccagttct
gaatctgtgtcctgtctgcgatggatcttatcatgtctggcaaccttactgcgtaaacag
gatctttcagtttggagttacccatcaactctacaggtttaccacggcctcctcagcttc
actgtccactccaaaccaaagattcgaaaggcagcacagcagggtgtttgttctatcctc
cgcggcagtgatgtcatgttttcagatgatgccccaagtcaccacccagctgcagtgacc
acagccaaattctgctgcaaggaaatggagcagtcaggaggcaacaaagaggacactacc
actctccacgtgcttggtcttctgaaggagcttctgtctacgtttcccctcagctctgtc
aagtcctgctgtgagactcttttgcgagtgatgactttgagccatgtgttggtgacggca
ggtgcaatgcaggctttccacaaactcttcagtagcaaacccggtccttccagcatgtct
gcagaactcaacgcccagatcatcaccgccttgtatgactatgttcctagcgagaatgat
ctacagcctttactagcatggcttgctgtcatggaaaaagctcacattcatctgtccagt
ttacagagctcgctgagtctcggacatcttcctcgcctcttcaccatcaccatgtcttgt
ctcctgtctcagcactcacaagtggtttcagctgcgacgcagacactgaaaaatctgata
aatgaatgtgttgctccacattcgactgagatcggtcctgtcctaccaagcacaaccact
ggaaacgcagcctatgtccttaagatgtttcacatcgtggaggaaggattgtcttatcgt
tttcatgcctcctggccgtttgtgctgcaaattctaggctgtttttatagagccgcagga
aaacaggctcattccattatgattaagagtctgcagtctctcagtgatctccgggccacc
cctcggttccccttctcaggagaactggatctggctgtgggtggtgcagtagagagcatg
ggtccagaggtggtcctgaaagctgtgcccctcctcatcactggaacagatgatgatctg
gagttcccacgtagctggctgatcccggtcataagagatcatgtgaagaacacacagctc
tcttactttacatcctactttttacccctggcaagcaaactcaaacagacagctgaagaa
ctggagcagtcaggtcagaaactaatggccaaagtttaccagaccctacagctgcagatc
tggactatgttacctggattctgcactaaaccgacagatctggcatcatttaagaacatt
gcccggtctctgggtatggccctcagtgaacgccctgatctccgcctttgcatctgtcag
gctttacgtgcgctcatcaacaagagctgtgagacagaggaagaaaaggctgaagtgagt
cgttttgccaagaactttcttcccatcttgtttaacgtgtacagccaccagccttcaccc
ggagaagtggcctctgcgaggatggctgtcctggacacaatcagagtttacctgaccatc
actgaggaaaagatggtgtggacgttcctgcagaaagcatcagagagacttgacagcaag
gacagctcggagttcacacggctcgctgttatggacctgattgtagccatggctccattt
gtgaataaagcatctatgaaacaaacatatgaactgattaaaccttacctggagagcaag
gactctggcatccagaagaaggcctacagggtgttggaggagatgtgtggaggagagagg
gaaccctgtaaggcttttgttctgggaaatcttgagcagctaaagaaaactctgctggac
agcctgaaaacggcggcctcacctgccaaaaggcccagattgaagtgtctgatccacata
gtgaagcagataaatgaagaacacaaggattttattatcactctgcttcctgaggtcatt
gtttgcacaaaggaaatgtctattggtgcccgtaaaaatgcctacacactcctggttgag
atcggcaaagcttttgaacgcttttgtgggaatacgaaagacgctgtgaatgaatatttg
ggccatatgtatgttggactcattggctccgtgactatgattacctgcacagtgctggct
cttacaagactagtgtttcattacaaagattcaatagatgtgtcctcactggaacagctg
ctgcacaacatctgtctgctgctcaccagcaggacacgagaaatcgtcaaagcctctatg
ggcttccttaaggtccttctcttcgttctggatgtaaaagtgctagccggtcaaatgact
gtcattatggaaggcatcagtaatatgagagatgatatgcgaagacattttaggataaaa
ctcaagagcatttacactaaattagttcgaaaatttgggtttgagctggtaaagagcatg
ttgcctgtcgagcaccacaaggtccttgcgaacatccgtaaagtggaggccagaagtaaa
agacgcaagatgctggataagacagacgaggatggatcagactcggaggaagagacatct
aatgtgaagggagagagcatcgaggacattctggctgaaaccgacgaatccgactcagaa
gacgagaagcccaaaaagggtcagaagaagcaggtaaagaaaaagggccaggcatggttg
aaggaaggaatatctgatgaaccactcaacttcctcgatccaaaggcagcacagcgagtt
ttggccaccaatccggccctaaagaagactgccaaagttgagcatgggttcaaggtgaca
tcagacggacgactgattatcaaagacgaggatgatgatgagggtgacaaagctaaagac
acagaaatggatgatatacttgaagaggctggagtcaaaactaagaagaatcagaagaga
aaaatgcaagatgatgatctagatgataatatggacattgaacccacaatgaaatacaaa
gctggtggcgtaggcatccacaggcctttgggtgaagttggcacagagtataaatctaag
aagggaaggggtgacgtgaagaaaaaaggcaaagttgacccgtacgcttacattcctctg
aagaaatcccaactcaaccgcaggaaaaaggccaaactgcagggccagttcaaaggtatg
gtcagaggagccaagaaaggagcgctttcaggaaagagaacattgcagaagaagaggaaa
gcttga
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