Paramisgurnus dabryanus (large-scale loach): 135786930
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Entry
135786930 CDS
T10799
Symbol
ercc6
Name
(RefSeq) DNA excision repair protein ERCC-6
KO
K10841
DNA excision repair protein ERCC-6
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
135786930 (ercc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pdab03036
]
135786930 (ercc6)
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135786930 (ercc6)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
135786930 (ercc6)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
135786930 (ercc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
WHD_Rad26_CSB
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
135786930
NCBI-ProteinID:
XP_065152621
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All DBs
Position
20:complement(13989531..14005913)
Genome browser
AA seq
1379 aa
AA seq
DB search
MPEEGNEDQTLPPLSSPVSVQENGFSIPGTSREEPAATHPEGVGPQNSRKSKALLHINRQ
EILSVAQSSQAAELQGLGVDVYDQDVLEQGVLQQVDRAIQEANQEAAKADAQKEYESVLD
DVRSCTIALKHINKVLEQLSPYAASSKDISRKLESVKRQKENKEKQLKKIRAKQKKLQAL
LDGEDIQKLEETLLIEDDEEPGPSTLGSMLMPSQETEWEELIRTGHMTPFGSRIPQKPEK
KEPRKVMLSEDSGFDKYLTDQAILAESRKKPPLKKKTTKKLITDIKDGKEQKNGSLSSKD
KKLQKRMRKLQRTALRAHPKARPKVEKDLNQGRRKGFGERASDSEGSEYVPSDELMDPEE
PERDDEFWVDEDDEYELKPYKKKKKEAKTRKSKEEESDEYIPSSSEDEDSQKSGKVKKCK
DDGDIECYRQRIRKWKRQRLRDKEAKREAGEEESEESEVEFDEGFKMPGFLWKKLFKYQQ
TGVRWMWELHCQQAGGILGDEMGLGKTIQIIAFLAGLSYSKLKTRGSNYRYAGLGPTVIV
CPATVMHQWVKEFHTWWPPFRVAVLHDTGSFTSRKEKLIPEIVAGHGILITSYSYIRIMQ
DYIQKYDWHYVILDEGHKIRNPNAGVTVACKQFRTPHRFILSGSPMQNNLKELWSLFDFV
FPGKLGTLPVFMEQFSVPITMGGYSNASPVQVQTAYKCACVLRDTINPYLLRRMKADVKA
NLSLPDKSEQVLFCRLTEDQRQVYQTFLDSKEVYQILNGDMQVFSGLIALRKMCNHPDLF
TGGPRLLRGIPDDQLTEEEHFGYWKRSGKMIVVESLLRLWFKQGHRVLLFTQSRQMLEIL
EVFLKENGYSYLKMDGTTTIGSRQPLIAQYNQNKDIFVFLLTTRVGGLGVNLTGANRVVI
YDPDWNPSTDTQARERAWRIGQKQQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPK
QRRFFKSNDIYELFTLSNPDGTQGTETSAIFAGTGSDVQIPKRHKSSHPSQGTSGPSQSH
SSAFDVEDQNTASLSNNKHATSVNDHLNNKLESHSNGYLPTNDVCLADSPQKHREKKKHC
ETKEKKFSDQHKHKKRKHSADARFEGCRISHLVKKRRYKKVDDEEKEDNKDEKKSDDYVL
AKLFKKSGIHSVMKHDSIMESSNPDFVLVEAEANRVAKDALRALKSSRQNLRAPFSRGST
PATPPPLKRRFGQKKNPLLSQAPRTTAETSEKCKDANIVKKSGIKKPGSGVHFSGEGAQE
PGSLSSSSLLAIMRARNHISQPQRQEDEEQEEEEERSTRPVPVPAAPTEHDELLVDLRNF
VAFQAQVDGQASTKEILEYFTPRLNSSQTAVFRELLRNICEFHRLPGQEGMWKLKADYR
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagaaggtaacgaggaccagacccttccacccttgtccagccctgtcagtgtc
caagaaaatggcttttccatcccaggaaccagtagggaagagccagcggctacacatcca
gaaggtgttggaccacagaactccagaaaatcaaaggccctgctccatatcaaccgtcag
gagatcctgtcagtggctcaaagctcccaagctgctgagcttcagggtttgggagtggat
gtctatgaccaagatgttctggagcaaggtgtgttgcagcaggtggacagggccatacag
gaggccaaccaggaagcggccaaagcagatgctcagaaagaatacgagtctgtgctggat
gatgtcaggtcatgtacaattgctctgaaacacatcaacaaagttttggagcagttatct
ccttatgcagcttctagcaaggacatcagtcgcaaattagagtctgttaaacggcaaaaa
gaaaataaggagaagcagttaaaaaagatcagagccaagcagaagaaactgcaggcctta
cttgatggagaggatattcagaagctcgaggaaacattattgattgaggatgacgaagaa
ccaggtccttctacgctgggcagcatgctcatgccatctcaagagaccgaatgggaagag
ctcatccgcacgggtcacatgacccccttcggttcacggatccctcagaagccggagaag
aaagaacctcgtaaagttatgctcagcgaggattccggttttgataagtacctcacagat
caggccattttagcggagagcaggaagaaaccccccttaaagaaaaagaccaccaagaag
ctaataacagatatcaaggatggcaaagagcagaaaaacggctccttatccagcaaagat
aagaaactccagaagcgtatgcgaaaactccagaggaccgctctgagggctcaccccaag
gccaggcccaaggtggagaaagatctaaaccagggcaggaggaaaggttttggggaacgg
gcatcagacagtgagggctcagaatatgttcctagtgatgaactgatggatcctgaggaa
ccagagagagatgatgagttctgggtagatgaggatgacgaatatgaacttaaaccttac
aagaagaagaagaaggaggctaaaacaagaaagtccaaggaggaagagagtgatgaatat
attcccagcagctcagaggatgaggattctcagaaaagtggaaaagtaaagaaatgtaaa
gatgatggtgatatcgagtgttacaggcaaaggattaggaagtggaaaaggcaaagactt
cgggataaagaggcaaaaagagaagctggcgaggaggagtcagaggagagcgaggtcgag
tttgatgaaggatttaaaatgcctggcttcctctggaagaaactcttcaagtatcagcag
acaggtgtcaggtggatgtgggaactgcactgccagcaagcaggaggcattctgggagac
gagatgggcctgggcaagacgatccagataattgccttcctggcaggcctaagctatagc
aaactaaaaacacgtggatccaattacaggtatgctggcctgggtcccacagtaattgtg
tgtcccgccactgtcatgcatcagtgggtgaaagagtttcacacctggtggcctccattc
cgtgtggctgttctccatgacaccggctccttcaccagcagaaaggagaagctcatccca
gagatagtggccggtcacggcatcctcatcacttcctactcgtacatacgcattatgcaa
gactatattcagaagtatgactggcattacgtcatcctggatgagggacacaagattagg
aaccccaatgctggggttactgtggcgtgcaagcagttccggacaccccacagattcatc
ctttcgggctcgcccatgcagaacaacctgaaagagctgtggtcgctctttgactttgtg
ttcccaggaaaactggggactctgcctgtcttcatggagcagttctctgtgcccattact
atgggcggatactctaatgcatctccagtgcaggtccagacagcctataaatgcgcttgt
gttcttcgtgacacaattaacccttacctgctgaggagaatgaaggctgatgtgaaagca
aacctctccttacctgacaaaagcgaacaggtcctgttctgcaggctgacagaagatcag
cggcaggtttaccagaccttcctggactccaaggaggtttatcagattttgaatggagat
atgcaggtcttctcgggcctcatagctctgaggaagatgtgcaaccacccagacctgttc
acaggtgggccgcgcttgctccggggcatccccgacgatcagcttaccgaagaagagcac
ttcggttactggaagcgatcgggaaagatgattgtggtggagtctcttctgcgcctgtgg
ttcaaacagggacacagagttctgcttttcacgcaatccagacagatgctggagatcttg
gaggtgtttctgaaagagaatggctactcctatctcaaaatggatggtaccaccaccatt
gggtccaggcagcctctcatcgctcagtacaaccagaacaaggacatctttgtctttctt
ttgacgacaagagttggaggtttaggagtcaacctgaccggtgcgaatagggttgtaatc
tacgacccagactggaacccaagcacagacactcaggcacgcgaacgcgcctggaggatc
gggcaaaaacagcaggtgaccgtatacaggctgttgacagctggaaccattgaagaaaag
atttaccacagacaaatcttcaaacagtttctcaccaaccgagtgctaaaagatcctaaa
cagagacggtttttcaaatctaacgacatttatgaacttttcacactgagtaatcctgac
ggcacacagggaacagaaaccagtgcaatatttgcaggcacaggctcagatgtgcagatt
ccaaaaagacacaagtcttcccatccttctcaggggacatcgggaccatctcaatctcat
tcatctgcatttgacgttgaagaccaaaataccgcatctctgtcaaacaacaaacatgct
acctctgtcaacgatcatttgaacaataaacttgaatctcattccaatggttatcttcca
acaaatgatgtttgtttggcagacagccctcagaagcacagggagaagaaaaagcattgt
gaaacaaaagaaaaaaagttctccgatcaacacaagcataaaaagcgcaagcactcagcg
gatgccagatttgaaggatgtcgtatttctcacctggtgaagaaaaggagatacaaaaaa
gtggacgatgaagaaaaagaggacaataaagatgagaaaaagagcgatgattatgtttta
gccaaactttttaagaaatcaggaatccacagtgtcatgaagcatgactccatcatggag
tcatcaaacccagattttgtacttgtggaagccgaggctaacagggttgccaaggatgca
ctgagagctcttaagtcctcaagacagaatctcagggcgcctttctcaagagggtcaaca
ccagccaccccacctccacttaagagaaggtttgggcagaagaaaaacccactactttct
caagcacctaggacgacggcagaaacatcagagaaatgcaaggatgcaaatattgtaaag
aagtcaggaataaagaagccaggatctggtgttcacttcagtggtgaaggggcacaagaa
cctggttctctctcatcgtcctctctccttgctattatgagggccaggaatcacatcagt
caaccccagagacaagaggatgaggaacaagaagaagaagaagagagaagcactcggccc
gttcctgtacctgctgctcctacagaacacgatgagcttctggtcgacctgaggaacttt
gtggccttccaagctcaggtggatggtcaagcaagcaccaaggagattctggagtacttc
accccaagacttaactcctcgcaaacagcagtttttagagaacttctaaggaatatctgt
gagtttcatagacttcctggacaggaagggatgtggaagcttaaagctgactacaggtaa
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integrated database retrieval system
