Paramisgurnus dabryanus (large-scale loach): 135786994
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Entry
135786994 CDS
T10799
Symbol
rims1a
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135786994 (rims1a)
Membrane trafficking [BR:
pdab04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
135786994 (rims1a)
Small GTPases and associated proteins
Rab associated proteins
135786994 (rims1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
PDZ
PDZ_6
FYVE_2
Zn_ribbon_recom
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-GeneID:
135786994
NCBI-ProteinID:
XP_065152728
LinkDB
All DBs
Position
20:15842034..15923071
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AA seq
1531 aa
AA seq
DB search
MSASVGPRGGPRPPTAQSSLPELPDLSHLTEEERKIIMAVMIRQKEEEEKDEAMLKEEKP
IQAKTVNLVGNKKPPQQNDISLHQQFATYKEQVRRTGQEPQQRQQGQHKDDAPTCGICHK
TKFADGCGNLCSYCQTKFCARCGGRVSLRSNNKKEDKVVMWVCNKCRRQQDMLTKSGEWF
SKSAELGSALSEPAMCGDPAAEKKLRSRSQNPLGSSVSTVHDTQSPAPTNPIKGLSTGIA
DALSSRSRSEPPQDRKKPPAASDQNGKPGPRGERRRGVSKVQSQASEDRQSGENRRESRR
LVKARSQEHGDADKGRVVLRRAEGQPRTPREKCRSDPNALHHPSKLQPTEPDGRPQPKPR
EAGQMGQENRVARKWADGRQASLDGQQQAYMPERTVGGTGNQGGPAVQGPPSKMNHTPQP
PAPGFRVGPAMPVGPPELREPQEWDRKLQPSHLDPGSAGLLRKSKRQKTESMLRNDSLSS
DQSESLRPPPPRPYKSKRGGGNKRQMSVSSSEEEGGSTPEYTSCEDVEIESVSERGGSGD
WECCQLDPTAWHPPVTWQPSKEGDHLIGRITLSKKGAMPKEAGALLGLKVVGGKITETGR
LGAFITKVKKGSLADVVGHLRAGDEVLQWNGKSLPGLTKKEVYNIILDSQTATQVELIVS
RPIGDIPRIPETSHPPLESTGSSSFESQKMERPSISVLSPSSPSGLRDAPQLLPGQLSVK
MWYDKVGHQLIVNVLQAIDLPPRQDGRHRNPYVKMYFLPDRSDKSKRRTKTVKKSLEPKW
NQTFVYSYVHRRDFREHMLEITVWDQPRIQEEESDFLGEILIELETALLDDKPHWYKLQT
HDVSSIPLPHPSPYLPRRHTHNDTPTKKLQPVENRSRERERGRTTTLEVPDQQRPTQYRS
RSVSPKREEESRARSRPPNVPAQRSLDEVPHNRRSRSPTRYHDRARVKERDYVDDSEVIL
IHRSVRGRSAECLHNQSSTLPACLKSKSRLSVVTATQRAVKLQVCRFTDEINFSDLQPSL
GRVRSASTNCLRPESNSSSPERDRSTQSLPRTRPTSPRILIQHASPEDDRQSRTLDKPSC
QKLGRKMSDSERVQPHSGPSFSSSTAAPSSTRKVRQLPQVPAKSSSVEQALASEERTRLM
KVRTFRSSAPSSTSQDMERTLKNKRELYKEQRRSCDNVSHKSSDSDVSDVSAISRASSAS
RISSTSYMSIQSEQPIGRFSRHMRSSNRSMLKSASGEIYTLERTDGSQSDTAVGTLGAGG
KKRRSSLSARVVAIVGIPSRRCRSTSQLSQTEAANKKAKGSSQIQRSQETGMAVEYPRNV
MARQASRESTDGSMNSYSSEGNLIFSGMRLGADSQFSDFLDGLGPAQLVGRQTLAAPAMG
DVQIGLINKKGQLEVEVIRARGLTPKPGSKSLPAPYVKVYLLENGVCKAKKKTKIARKTL
DPLYQQVLLFEESPQGKVLQVIVWGDYGRMDHKCFMGVVQILLEELDLSSTVIGWYKLFP
PSSLVDPTLAPLTRRASQSSLDFSGPPGIRS
NT seq
4596 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcggtggggccccgcggcggccctcgcccacccaccgcgcaaagctctcta
cccgagctcccggacctcagtcacctcaccgaggaggagaggaaaattatcatggctgtg
atgattcggcagaaggaagaagaggagaaggatgaggccatgttaaaagaggagaagccc
atacaagcaaaaactgtaaacttggtcgggaacaagaaaccccctcagcagaatgacatc
agcttgcaccagcagtttgccacctacaaagagcaggtgagacggactggccaggagccc
cagcagaggcagcagggccaacacaaagatgacgcccccacctgtggcatctgccacaag
accaagtttgctgatggctgcggcaacctgtgctcctactgccagacgaagttctgcgcc
cggtgtggtggaagggtgtctctgcgttccaataataagaaggaggacaaagtggtaatg
tgggtatgtaacaagtgccgtaggcaacaggacatgctcactaaatcaggagaatggttt
tccaagtctgcagagctagggtcagcattgagtgagccggccatgtgtggagaccccgct
gctgagaagaagttgcgctctcggtctcaaaaccctctcggctcttccgtttctactgtc
catgacacccagtcacctgccccgactaaccctattaaaggcctctctactggaatagct
gatgcgctgtcatcccgctcacgcagtgagccaccgcaagacagaaaaaagccaccagca
gcctccgaccaaaatggcaaaccagggccaagaggtgaaagacggcgaggcgtatccaaa
gtccagtcccaggcttccgaagataggcagtctggagaaaatcgaagggaaagtcgaaga
ctggtgaaggctcgatctcaggagcacggcgatgctgacaagggaagggttgtgctcagg
agagctgaggggcaaccgagaacacccagggaaaaatgcaggagtgatccaaatgcccta
catcatccatccaagcttcaaccaacggagcctgatggacgtccgcagcccaagccaagg
gaagcagggcagatgggacaggagaacagggttgcacgaaaatgggcggatgggcgacag
gcctcgttggatggccagcaacaggcctatatgccagagaggaccgtggggggtacaggt
aaccagggcgggcctgccgtgcagggtcctccctctaaaatgaaccacaccccacagcca
cccgctccggggttccgggtgggccccgccatgcctgttggcccacctgagctcagggag
ccccaggaatgggacagaaagttgcagccgagccacctggaccccggctcggctggactg
ttgcgcaaatcgaagcgtcaaaaaactgagagcatgctccgcaatgattcacttagctcc
gaccaatcagagtctttacgaccacctccgccccggccctacaagagcaaacggggcggc
gggaacaagaggcagatgtccgtcagcagctcagaggaagaaggcggttcgacaccggag
tataccagctgtgaggatgtggagattgagagcgtaagcgagcgaggggggtcaggggac
tgggagtgctgtcaactagaccccactgcgtggcatccaccagttacatggcagccctcc
aaagaaggtgatcatttaattggccgaatcacattgagtaaaaaaggagccatgccaaag
gaggccggggctctgctggggctaaaggtggtgggagggaagattacagaaactggaaga
cttggggccttcatcaccaaagtcaagaaaggaagtctagctgatgtggttggacatctg
cgagccggtgatgaggtgcttcagtggaatggtaaatcattaccaggattaaccaagaag
gaagtttacaatattattctggattcccaaacagcaacacaagttgaattaatagtttca
aggccaataggtgatataccacgaataccagaaacatcacatcctccattagaatccacg
ggttcaagttccttcgaatcacagaaaatggaaagaccatctatatctgtcctgtcccca
tccagcccaagtggtcttagagatgcccctcagctactgcctggtcagctgtcggtgaag
atgtggtatgataaggtaggccatcagctgatagtgaatgtactacaggccatagacctg
ccgcctagacaggatggacgtcacagaaacccctatgtcaaaatgtacttcctgcctgat
agaagtgataaaagcaaaagacggacgaagacagttaagaaaagtctggagcccaagtgg
aaccagacgttcgtttattcttacgtgcaccggcgggatttcagggagcacatgctagag
ataactgtgtgggaccaacccagaatccaagaggaggagagtgacttcctgggagaaatc
ctgattgagctggagactgccctactggatgataaacctcactggtacaaactgcagacc
catgatgtctcctccattcctctgccacacccatcgccatacctgccccgacgacacacc
cacaatgacacgccgaccaaaaagctgcaacctgtagaaaaccgatcaagagaaagagag
agaggtcgaacaacaactttagaggttcctgatcagcagaggccaactcagtatcgctcg
cggtcagtgtccccaaaaagagaagaagaaagcagggctcggtcccgtccacccaatgtt
cctgcacagaggagtctggatgaggtcccgcacaaccgtagatcacgttccccaacacgt
taccatgaccgtgcccgtgtgaaggagagagattatgtagacgacagtgaggtcatcttg
atacacagatcagtgcggggtagaagcgcagagtgtctgcacaaccaaagctcaacactt
cctgcatgccttaagtcaaagtcacggctgtcggtagtcactgctactcaacgtgcagtc
aaactccaagtttgtaggttcacagacgagatcaactttagtgatctccagccctctctt
ggcagggttagaagtgctagtaccaactgtctgagaccagaatctaattccagttctcct
gaacgagacaggagcacccagtctctgccccgtaccagacccacaagccccaggatccta
attcagcatgcctccccagaagatgacaggcagtcgagaactctggacaagccgagctgc
cagaaacttggcaggaaaatgtctgacagtgagcgggtgcaaccccactccggcccctca
ttttcctcttcaacagcggccccttcttcgacacgtaaggtcagacagttaccccaagtc
cccgccaaaagcagcagtgtagagcaagctcttgcctcagaggagcgaacgcggctaatg
aaagtacgtaccttccgatcatcagctccctccagtaccagccaggacatggagaggacg
ctgaagaataaacgagagctttataaggagcagcgacggagctgtgacaacgtgtcccat
aagtcctcagacagtgatgtcagcgacgtgtcagccatctctcgcgccagcagtgcctcg
cggatcagtagcaccagctacatgtccattcaatcagaacagccaataggtcgcttcagc
cgccacatgcgttcatccaaccgcagcatgctgaagagtgcaagtggggagatctacaca
ctggagcgtacggatggcagtcagtcagacactgctgtcgggacactgggagcaggagga
aaaaagcgcagatccagccttagtgcccgcgtcgtagccattgtgggcattccctcccgc
cgctgcaggagcacctctcagctcagtcagacagaagcagccaataagaaggcaaaggga
tccagtcagatccagcgcagtcaggagacgggtatggcagtggagtatccccgcaatgtc
atggcccgccaggccagccgagagtccaccgacggcagcatgaacagttacagctctgag
ggcaatctgatcttctcagggatgaggttgggagctgacagccagttcagtgacttccta
gatggtcttggtcctgctcagttggtgggacggcaaacactggccgcacctgctatggga
gatgttcagattggactaataaataagaaaggacagctggaggtagaggttatcagggct
cgtggtcttacacctaaaccaggttccaaatcgctgccggctccctatgtcaaggtctat
ttgctggaaaacggagtgtgcaaagccaaaaagaaaaccaagattgcacgaaaaacgctt
gatcctctgtatcaacaagtgctgttgtttgaggagagtccacagggtaaagtcctccag
gtaatagtctggggagattatgggcgcatggaccacaaatgtttcatgggagttgtacag
attcttttagaagagctggatctttctagcacagtgatcggttggtacaaactctttccc
ccctcatcattggtcgatccgacgttagctcctctcactcgccgcgcttcccagtcatcg
ctggacttttcagggccgccaggcatcaggtcctag
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