Paramisgurnus dabryanus (large-scale loach): 135787020
Help
Entry
135787020 CDS
T10799
Symbol
sgpl1
Name
(RefSeq) sphingosine-1-phosphate lyase 1 isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab00600
Sphingolipid metabolism
pdab01100
Metabolic pathways
Module
pdab_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
135787020 (sgpl1)
Enzymes [BR:
pdab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
135787020 (sgpl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Aminotran_1_2
DegT_DnrJ_EryC1
SepSecS
HTH_MCM7
Motif
Other DBs
NCBI-GeneID:
135787020
NCBI-ProteinID:
XP_065152785
LinkDB
All DBs
Position
20:17087287..17098654
Genome browser
AA seq
574 aa
AA seq
DB search
MAQSAISALEVYKEMLLLYAEEARQYVNSQCSALEPWQIIVITLLSTLGLLWLKGFLFQQ
ESLTSRAKKQFFKIIRKIPFIGASIQSQLNKALDDMSLSLCTLKEGMGYTKLLPAQGLTH
KQLLDKIKEYETLGEVDWGKGKVSGAVYWGDEKLTDLLVKVYGEFAWTNPLHPDIFPGVR
KMEAEVVRMTCALFNGGPDSCGTVTSGGTESILMACKAYRDMAHERGIKHPEIIAPVSVH
AAFDKAAHYFGMKLIHVPLDEKTMKVDVKAMKRAISKNTAMLVCSAPQFPHGIVDPVEEV
AKLAVKYNIPFHVDACLGGFLIVFMKKAGFKLDPFDFRVKGVTSISADTHKYGYAPKGSS
VILYSDKKYRHYQYFVAPDWQGGIYASPSMAGSRPGGIIAACWATMMHMGEKGYVEATKK
VVETARKIKAGIRKIEGVFVFGDPEVSVVALGSDIFDIFRLSNALTSKGWNLNTLQFPSS
IHICVTMLHTQSGVAEQFIDDVKKEVAIIMKNPQEKTTGMGAIYGMAQSIPDRSMVTEVS
QGFLDCLYSTEVPKIQNKHHKNHKNHMNGNSKVH
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatctgctataagtgccttggaggtgtataaggagatgctactgctgtacgca
gaagaggctcggcagtatgtgaactctcagtgctctgctcttgaaccatggcagatcatc
gtaatcacattgctgtccacgctcggtttactgtggttaaagggcttccttttccagcag
gagagtctgacgtcaagagcaaagaagcagttctttaaaatcatcagaaaaatccctttt
ataggagcatctattcaaagtcagctcaacaaagcattggatgacatgtcattaagtctt
tgcacactgaaggaaggcatgggctacaccaaactgctcccagcacaaggcctcacccat
aaacagctccttgacaagatcaaagaatatgagacattgggtgaggtagactgggggaaa
ggaaaggtgtcaggtgcggtctactggggagatgagaagctcacagatcttctggtgaag
gtctatggtgaatttgcctggaccaatccactccacccagatatattccctggggttagg
aaaatggaggcggaggtggtgcggatgacatgtgccctctttaacggaggaccagactca
tgtggcacagttacttcgggtggaaccgaaagcatcctcatggcatgcaaggcatacaga
gacatggcccatgaacgcgggatcaagcacccagaaattattgcaccggtgagtgtccat
gctgcatttgacaaagctgcacattacttcgggatgaagcttattcacgtacctctggac
gagaagaccatgaaagttgatgtgaaggccatgaagagggctatctccaaaaacactgca
atgctggtgtgttcagctccccagttccctcatggaattgtagatcctgtagaagaagtg
gcgaagctggcagtaaaatacaacatcccatttcacgtggatgcttgcttgggtgggttc
ctaatagtatttatgaagaaggctggtttcaaacttgatccttttgatttccgggtcaaa
ggtgtgaccagtatctcagctgatacacacaagtatggatatgccccgaaaggctcttct
gtgattctgtacagtgacaagaaatatcgccactaccagtattttgtagcacccgattgg
cagggaggaatttacgcatctccttcaatggctggctcacgcccaggaggcatcatagcc
gcttgttgggctaccatgatgcacatgggtgagaaaggatacgtggaggctaccaagaaa
gttgttgaaacagcccgaaaaatcaaagcaggcattcgtaaaatagagggggtgtttgtg
tttggggatccagaagtgtctgtggtggcactgggctccgatatctttgatattttccgc
ttatctaatgcattgacctcaaagggctggaatctcaacactctgcagttcccatctagc
atacatatttgtgttacaatgctacatacacagtctggtgtagcggagcagttcatcgat
gatgtaaagaaagaagtagctattataatgaaaaatccacaagagaagaccacaggaatg
ggagccatctatggtatggcccagtccatccctgaccggtcgatggtgactgaagtctca
caaggctttttggactgcctctatagcactgaagtgcccaagatacaaaacaagcaccac
aaaaaccataagaaccacatgaatggcaactctaaagtgcactga
DBGET
integrated database retrieval system
