Paramisgurnus dabryanus (large-scale loach): 135787119
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Entry
135787119 CDS
T10799
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit-like isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04010
MAPK signaling pathway
pdab04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
135787119
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
135787119
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135787119
Transcription factors [BR:
pdab03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
135787119
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
Ank_2
RHD_dimer
Ank
Ank_3
Ank_4
Ank_5
Ank_KRIT1
Death
Motif
Other DBs
NCBI-GeneID:
135787119
NCBI-ProteinID:
XP_065152936
LinkDB
All DBs
Position
20:complement(18738873..18761897)
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AA seq
929 aa
AA seq
DB search
MILRIQRVCSDDPATTHRMAGALRMDDLQYPMKFDRESFMEFPYLQPPFDVKTEPFVAET
VHGPYLQIIEEPKQRGFRFRYECEGPSHGGLPGASSERNRRTYPTVKISNYVGHARVEVQ
LVTHTDPPRVHAHSLVGRQCTDNGICMIDVGPNDLTAQFSNLGILHVTKRGVVEVLTKRL
REEKRRLKEPGYKFSDGEEQAMLQEAKELGKNMDLNIVRLKFTAYLQDSDGGFTRALKPV
VSNPIYDSKSPNASNLKISRMDKTSGSVLGGEEIFLLCDKVQKDDIDIRFYEEEEDGGWE
AFGDFSPTDVHKQYAIVFKTPPYRCTDITRPVTVFLQLKRKKGGDCSEPKQFTYIPHNQD
KEEVQRKRMKSLPQPYDHWRGGPQGGAGGFGGPGAGTGGGGGGMGGGGFQFNHNLDNPAF
FVGGCGGYGGAQLSSSAPQTDRSQDQPTNTQTQPGSPVQQQLIQIATALQNHATFTAKST
ARALLQYCSTGDVRNLLNLQRHLCGVQDENGDTPLHLAVIHQQDRVVQQLIQTMLNSPQP
KFINKFNKLSQTPLHLAVITKQPKLVEMLMRTGADPSLLDRDGRTALHLAAHTGDEAILR
VVLGMLGEHHCHLVNCADFSGQYPVHLAVKKDGEHCLRLLVEAGAKINMPEQKSGYTALH
LAVRDNLLKVACNLITELKADVNTCTFGGNSPLHLAASQGSPPLCSMLIAAGANKCLEND
EPLFLGSSSSDEDEEIETKDVDRQLQTEIVPQVECMSISSERGPFNPRKRPAAGHTPFDL
AKCQKVKDLLDGRKAPKPSPLASKRTKMSTEEVNQGLDSEVLTKLCGILIQDDVPLRKLA
ENLGMLTLTHLYQESASPYQKLLENYQLSGGPVDGLVEALQSLGVSDGVRLLRDSQLRED
KQSTDSKADSGFGSQSITEEIANPTVANH
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagaatccaaagagtctgttcggatgaccctgcaacaacacacagaatggct
ggagctttaaggatggacgatttacaatatccaatgaagtttgacagagagtcatttatg
gaatttccatatctccaaccaccttttgacgttaaaactgaaccctttgtggcagagaca
gttcatggaccctacttgcagatcattgaggaaccaaagcagagaggatttcgattccgt
tatgaatgtgagggtccgtcccatggaggtttgccaggtgcatctagtgaaagaaacagg
aggacatatcccacagttaagatatccaactacgtgggccatgctcgagtggaagttcag
ttggtgacacacacggacccccctcgtgttcatgcacacagccttgtgggacgccagtgt
actgacaatggcatatgcatgattgatgtagggcctaatgatctcacagcacaattcagc
aatttaggtattttgcatgtcactaagagaggagtggtggaagtattaaccaaaaggttg
agagaagagaagaggagattaaaggagcctggttataaattcagtgatggagaggaacag
gctatgttgcaagaagccaaagaattgggtaaaaacatggaccttaacattgtaagatta
aagtttaccgcataccttcaggacagcgatggtggttttaccagagccttgaagcctgtt
gtctccaatcccatctatgacagtaaatcaccaaatgcctccaatctgaagatttcccgt
atggataaaacctctggatctgtgcttggtggggaagaaatatttctgctctgtgataaa
gttcaaaaagatgatattgatattcgtttctatgaggaggaagaagatggaggatgggag
gcgtttggagacttttcacccactgatgttcacaagcagtacgcaatcgtgttcaagacc
ccgccctaccgctgcacagacatcacacggccagtcaccgtgtttctgcagcttaagagg
aagaagggcggcgactgcagtgaacccaagcagtttacatatattccacacaatcaagac
aaagaagaggttcagagaaagaggatgaagtcccttcctcagccctatgatcactggcga
ggaggacctcaaggaggcgcgggaggctttgggggtcctggagccggaacaggaggagga
ggaggtggaatgggtggaggaggttttcaatttaaccacaatctggacaatccagcattt
tttgttggtggttgtggtggctatgggggagcacagctgtcaagctccgcccctcagaca
gatagatctcaagatcagccgacaaacacacaaactcagcctggctccccagtgcaacag
caactcattcaaatcgccacagctctgcaaaatcatgccacattcacagcaaagagcact
gcccgtgctttactacaatactgcagcaccggggatgtgcgtaacctgctgaatcttcag
agacatttgtgtggcgtgcaagatgagaacggagacacgcctctgcacttggctgtaatc
caccagcaagatcgtgtggtgcaacagctgattcagacaatgctaaacagcccacagccc
aagtttatcaacaaattcaacaagctcagccagacaccattgcatctggccgtgatcacg
aagcagcccaagctagtcgagatgctgatgagaacgggtgcagatccgagtcttcttgac
cgggatggtcgaacagcacttcatctggctgcccacaccggagatgaagctatactacga
gtggtcctgggaatgctgggagagcaccactgccatttagtaaactgtgctgacttctca
ggtcagtatccagtccatcttgcggtgaagaaggacggagagcactgtctcagattgttg
gtggaggctggagcaaaaatcaacatgccagagcagaaaagcggctacacagcactacac
cttgcagtgcgggataaccttttaaaagtggcctgtaatctcattactgagctaaaagct
gatgtgaatacctgtacctttgggggcaacagtccccttcacctcgctgccagtcagggt
tctcctcctctctgctccatgctgatagctgcaggtgccaataaatgcctggagaacgat
gagcctcttttcctgggctcgtcttcgtcggatgaagatgaggagattgaaacaaaggac
gtcgacaggcagcttcaaactgagatcgttccgcaagttgagtgcatgtcgatatcatcc
gagcgaggtccatttaacccacgcaagagacctgcagctgggcacacaccatttgacctg
gccaagtgtcaaaaggttaaagatctgttagatggtagaaaagctcccaagcccagtcca
ctcgcctccaaaaggacaaaaatgagcacagaggaagtgaaccagggtttggacagtgag
gtgctcactaaactctgcggtatccttattcaagatgacgtacccttgagaaagctggca
gaaaacctgggcatgctcacacttactcacctgtatcaggagagcgcctcaccctatcag
aagttgctggagaactaccagctgagtggtggtcccgtggatggcctggtggaggcgctg
cagtctctaggggtgagtgatggagtgagattacttagagacagccaactcagagaagac
aagcagagcacagattccaaagcggacagtggttttggtagtcagtccatcacagaggaa
atcgcgaatcctaccgtggccaatcactga
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