Paramisgurnus dabryanus (large-scale loach): 135787197
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Entry
135787197 CDS
T10799
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04814
Motor proteins
pdab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
135787197 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135787197 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135787197 (dctn1b)
03036 Chromosome and associated proteins [BR:
pdab03036
]
135787197 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pdab04812
]
135787197 (dctn1b)
Membrane trafficking [BR:
pdab04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
135787197 (dctn1b)
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
135787197 (dctn1b)
Cytoskeleton proteins [BR:
pdab04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
135787197 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
Motif
Other DBs
NCBI-GeneID:
135787197
NCBI-ProteinID:
XP_065153074
LinkDB
All DBs
Position
20:complement(21526143..21554382)
Genome browser
AA seq
1259 aa
AA seq
DB search
MSQIKRYTYSRTTSSGSSRMSSDGGGRPVKVGSVVEVIGKGHRGIVAYIGNTLFASGKWV
GVILEESRGKNDGTVQGKRYFTCQENHGIFVRQSQIQLVDDGADTTSPDTPEAATSKMLK
REIIEGPKSNKVRGIKPKKTPTTRKTTTRRPKQTRTGVGVKMGSGSASAGEMSSSEPSTP
AQTPLAAPVIPSPVGTLISPGAPPIPGPTKEEESLRAQVKDLEEKLETLKIKRTEDKAKL
KELEKHKIQLEQLQEWKCKMQEQQSELQKQLKEAKKESKEALEAKEHYMEEMADTADAIE
MATLDKEMAEERAESLQLEADALKEKLEELTMDLEILKHEIEEKGSEGAASSYHVKQLEE
QNARLKEALVRMRDLSASEKQEHAKLQKQMEKKNLELETLRSQKEKLQEELKMAEKTVDE
LKEQVDAALGAEEMVEMLTERNLDLEEKVRELRETVADLEAINEMNDELQENARETELEL
REQLDLGAASIRESEKRVEAAQETVADYQQTIQKYRELTAHLQEVNRDLMSQQEASTEQQ
QPAEIFDFKIKFAETKACAKAIEMELRKMEVAQANRQVSLLISFMPDSFLKHGGDCDCIL
ALLLIPRLICKAELISKQAQEKFELTETCTQKAGMRGAVGEQLSFAAGLIYSLTLLQAAL
HKYEYSLNQCSVEVYKRVGSLYSEMSVHERSLDFLIDLLHKDLLDETVNVEPLTKAIKYY
QQLYSIHLAEQPEDCTMQLADHIKFTQSALDCMAVEVGRLRAFLQAGQDEEIFCVLLKDL
DTFCSDIRQFCKKIRRRMPGTDAPGIPAALSFGPQVCETLAESRKQLAWVNAVLQEVAAA
AAQLIAPLSEHEGLPALKLEDMAFKAAEQIYGSQGINPQECLRQSCNVVIATMNKMATAM
QEGEYDSEKPQAGISPVEVRAGVLRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELS
EANVRLSLLEKKLDSSSKDADERVEKIQTILDETHSILKKKEKEFEETMDALQADIDQLE
AEKLELKQRINSQSKMSMDGSRGSPASGIASIVTCGITPGMCAAAGVQVIDSPLLTQQIE
AQRLSIKHLKNENNRLKAEKMRAQLASLPPLNVPKLGWREGCRPEVLSSALYRKTDQLLD
TLLQMSANVQVVDITGKSPVSPSGQLLEQTARLQSLRDTLDRLKDEVAEHVVTHRPGAQA
SSDFATFPCTSFVKAKEEKKGDAVLVGRVMMPCPRGQEQVHRLVLSQPQLQRIHRLLRT
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagataaaaagatacacttacagcaggaccaccagcagtggcagcagcaggatg
agttcagacggaggtgggcgacccgtgaaggtgggctctgtggtggaggtgatcggcaaa
ggtcatcgtggtatcgtagcatatattggcaacacactgtttgcctctgggaaatgggtg
ggagtgattctcgaagaatctagaggcaagaacgacggtactgtgcagggaaaaagatat
ttcacctgtcaggagaaccacggcatatttgtacgccaatcacagatccagttagtagat
gatggtgcagacacaacgtctcctgacacccctgaagcagccacctccaaaatgctgaag
cgagagataattgaaggtccaaagtcaaacaaagtgcgaggaatcaaacccaaaaagacg
cctacaactcgtaagaccacgaccagaaggccaaagcaaacacggacaggagtgggggtg
aagatgggctcaggttctgcatctgctggagagatgagcagcagtgagcccagtacacct
gcacaaaccccactagctgcccctgtaataccttcacctgtgggaaccctcatctcacct
ggagctcctcccattccaggacccaccaaggaagaggagtcgctgcgtgcccaggtgaag
gatctggaggagaagctggagactttgaagataaagaggacggaggacaaggcaaagctg
aaggagctggagaaacacaagatccagcttgagcagctgcaggagtggaagtgtaagatg
caggaacaacaaagcgaactgcagaaacaactcaaggaggccaagaaggaatctaaggaa
gctctcgaagctaaagaacactacatggaggagatggcagatacagcagatgccattgag
atggccacactggataaggagatggcagaagagcgagccgagtcgctgcagctggaggct
gatgctctcaaagagaaactggaggagctgacgatggacctggagatacttaaacatgaa
atagaggaaaaaggctcagagggagcagcatccagttatcatgtaaaacagttagaggag
cagaatgcacgactgaaggaggctttagtgaggatgcgtgacttgtctgcatcagagaaa
caagagcatgcaaagctacagaaacaaatggagaagaagaacctcgagctggagacacta
agatcccagaaagagaaactccaggaggagttgaagatggctgagaaaacagttgatgag
cttaaagagcaagtggatgctgctctcggtgcagaggagatggtggagatgttgacagaa
agaaatctggatctggaggagaaagtacgagagctcagagaaacagttgcagatctggaa
gccatcaatgagatgaacgatgagctgcaggagaatgccagagagacagagctggagtta
agagagcagttggatctgggtgctgccagtataagagagtcagagaagcgtgtggaggcg
gctcaggaaaccgtggcagactaccagcagaccatccaaaaatacagagagctcactgcc
cacctgcaggaggtaaacagggatctaatgagccagcaggaagccagcacagagcaacaa
cagcctgctgagatcttcgatttcaagatcaaatttgcagagaccaaagcctgcgccaag
gctatagaaatggagctgcgcaaaatggaggtggctcaggctaacaggcaggtgtcgctg
ttgatctccttcatgcctgattccttcttgaaacacggaggagattgcgattgcatcctt
gcactgctgctcatcccacgactcatctgcaaggcggagctgatcagtaagcaggcgcag
gagaagtttgagttgactgagacctgcactcaaaaggctgggatgagaggagctgttggg
gagcagctcagttttgcagcaggactcatctattctcttacactgctacaggcagcgctg
cataaatatgaatattctttaaatcaatgcagtgtggaggtgtacaagcgtgtgggatct
ctttactctgaaatgagcgtacacgagcgttcccttgacttcctcatagaccttctgcac
aaagacctgctggatgaaactgtcaatgtggaacctcttaccaaagctattaaatactat
cagcaactttacagtattcatcttgctgaacaacctgaggactgtaccatgcagctagcc
gaccacatcaaatttacccagagtgccctggattgcatggcggtagaggtggggcgtctg
agggcctttctgcaggccggacaggatgaggaaatcttctgtgtgctgctcaaagacctg
gacacgttttgtagtgacatacgacagttttgtaagaagattcgtcgtcgcatgccaggc
acagatgcaccgggcatcccagctgccctcagcttcggaccacaggtgtgtgagaccctg
gcagagagcagaaagcagttggcctgggtaaatgctgtgcttcaggaagtggccgcagca
gccgctcaactcattgctcctctcagtgaacacgagggacttccagctctcaaacttgag
gacatggcctttaaagcagctgaacagatctatgggtcacagggtatcaatccccaagag
tgcctgcgtcagtcatgcaatgttgtcatagcaacaatgaacaagatggctactgctatg
caggagggtgaatacgactcagagaaaccacaggctgggatatctcctgtagaggtcaga
gcgggagtgttgagggcagagatcactgatgctgaaggactcggactcaaacttgaggat
agagaaactgtcatcaaagagctcaagaagtcacttaaaataaagggagaggaacttagt
gaggccaatgtgcgtctcagtctgctggagaaaaagcttgacagctcatctaaagatgca
gatgagcgcgtagagaagatccagacaatcctggatgagacacattcaatcttaaaaaag
aaggaaaaggaatttgaagagaccatggatgctctccaggctgatatagaccaactagag
gcagagaaattagagcttaaacagagaatcaacagccaatcaaagatgagcatggatggg
tcgagaggaagtccagcctctggtatcgcctccattgtgacatgtggcataactcctggc
atgtgtgcagctgcaggagttcaagtcatagattctccactgctgactcaacagatcgaa
gctcagagactcagtataaagcatctgaaaaatgaaaacaacagactaaaggcggaaaag
atgcgtgctcagctggcatctctccctccactgaatgtgccaaagcttggctggcgagag
ggctgcaggcctgaggtcttgtctagcgccctctaccgaaaaacagaccaactgctggat
actctccttcagatgagtgccaacgttcaagtagtggatatcacaggaaaatccccagtg
agtcccagtggccaactgttggagcaaaccgcaagactgcagtcacttagagacactctt
gataggcttaaggatgaggtagctgaacatgtggtgactcataggcctggtgcacaagcc
tcatctgattttgccacatttccctgcacttcatttgtgaaggcaaaggaggagaagaaa
ggagatgctgtgttagttgggcgtgtgatgatgccttgtcctcgagggcaggagcaggta
catcggctggtcctttcacagcctcagctccagagaatccatcgcttgctgcggacataa
DBGET
integrated database retrieval system
