Paramisgurnus dabryanus (large-scale loach): 135787322
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Entry
135787322 CDS
T10799
Symbol
kcnma1a
Name
(RefSeq) calcium-activated potassium channel subunit alpha-1a isoform X3
KO
K04936
potassium large conductance calcium-activated channel subfamily M alpha member 1
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
135787322 (kcnma1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pdab04040
]
135787322 (kcnma1a)
Ion channels [BR:
pdab04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
135787322 (kcnma1a)
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Gene cluster
GFIT
Motif
Pfam:
Slo-like_RCK
Slowpoke_C
BK_channel_a
Ion_trans
Ion_trans_2
TrkA_N
BNR_3
Motif
Other DBs
NCBI-GeneID:
135787322
NCBI-ProteinID:
XP_065153282
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Position
20:complement(24183741..24463648)
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AA seq
1324 aa
AA seq
DB search
MLDVAGGNGSYGSSSPRMSNTINFNKNADSSVSISKMDVIIPFSPDVPCDNNGQRMWWAF
LASSMVTFFGGLFIILLWRTLKYLWTVCCHCKIKNKEAQKVNNPINSQADGPPKRLNEKD
EVPVSEVGWMTSVKDWAGVMISAQTLTGRVLVVLVFALSIGALGIYFIDSSDPIESCQNF
YKDFTLQIDMAFNVFFLLYFGLRFIAANDKLWFWLEVNSVVDFFTVPPVFVSVYLNRSWL
GLRFLRALRLIQFSEILQFLNILKTSNSIKLVNLCSIFISTWLTAAGFIHLVENSGDPWE
NFQNSQPLSYWECVYLLMVTMSTVGYGDVYARTTLGRLFMVFFILGGLAMFASYVPEIIE
LIGNRKKYGGSYSAVNGRKHIVVCGHITLESVSNFLKDFLHKDRDDVNVEIVFLHNISPN
LELEALFKRHFTQVEFYQGSVLNPHDLARVKIESADACLILANKYCADPDAEDASNIMRV
ISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKAGFIAQSCLAQGLS
TMLANLFSMRSYIKIEEDTWQKYYLEGVANEMYTEYLSSAFVGLSFPTVCELCYVKLKLL
LIAIEYKSEQRESSILINPGNHVKMQEGTLGFFIASDAKEVKRAFFYCKACHDDITDPKR
IKKCGCKRTKMSVYKRMKLACCFDCGRSERDCSCMSGSVHSNMDSLQRAFPLSSVSVHDF
STSLRASKYKFNGYIRSPDGATTPGKMGSERQSGVRFKAECALVEDEHPSTLSPKKKQRN
GGMRNSPNCSPKMMRHDPLLVPGNEQVENMDASVKRYDSTGMFHWCPSKEIEKVILTRSE
ASMTVLSGHVVVCIFGDVTSALVGLRNLVMPLRASNFHYHELKPIVFVGSLDYLRREWET
LHNFPKVSILPGTPLSRADLRAVNINLCDMCVILSANQNNIDDASLQDKECILASLNIKS
MQFDDSIGVLQANSQGFTPPGMDRSSPENSPVHGLVRQASVTTGSNIPIITELAKPGKLL
PLVSFNQEKNTGTNIQMITELVNDSNVQFLDQDDDDDPDTELYLTQPFACGTAFAISVLD
SLMSATYFNDNILTLIRTLVTGGATPELEALLAEENALRGGYSTPQTLANRDRCRVAQLA
LYDGPFADLGDGGCYGDLFCKALKTYNMLCFGIYRLRDAHLGAPSQCMKRYVITNPPYEF
ELVPTDLIFCLMQFDHNAGQSRASLSHSSHSSHSSSKKSSSVHSIPPTNRQNRSSKAREA
RDKQNATRMNRMGPEKRWFTDEAENAYPRNIQIKPMSTHMANQINQYKSTSSLIPPIREV
EDEC
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgctagatgtggcaggtggcaacggatcctatggcagcagcagccctagaatgagtaat
actatcaattttaataaaaacgcggactcttctgtctctatatcgaagatggacgtgatc
atcccgttctcacccgacgtaccctgtgacaacaatggtcagcgcatgtggtgggctttc
ctcgcctcatccatggtgacgtttttcgggggtctcttcatcattctcctgtggaggacc
ctcaagtacctgtggactgtctgctgtcattgcaaaatcaaaaataaggaggcacagaag
gtgaataacccgataaacagccaggctgacggaccaccgaagagattgaatgagaaagat
gaagtcccagtcagtgaggtgggctggatgacctcagtgaaagactgggcaggggtcatg
atctcagcacagacccttaccggccgagttctggtggtattagtctttgcactgagcatc
ggcgctctgggaatatacttcatagactcgtcagatcctatagagtcctgtcagaatttc
tacaaagacttcactttacagattgacatggcattcaacgtgttcttcttactctacttt
ggactacgtttcatagcagccaacgacaagctgtggttctggttggaggtgaactcagtg
gtggacttcttcaccgtaccgcccgtgtttgtgtccgtgtatctgaacaggagctggtta
ggtcttaggttcctaagagccttgagattgatacagttctcagaaattttacagtttttg
aatatcttaaaaacaagtaattccatcaagctggtgaacctgtgttccatcttcataagc
acatggctcactgctgcaggattcattcatctggtggaaaactcaggggatccgtgggaa
aactttcaaaattctcaaccgctctcatattgggaatgtgtgtacttattaatggtgact
atgtctacggtgggatatggagacgtctatgcaagaactactctcggacgccttttcatg
gtcttcttcattctcggtggtctggccatgtttgccagctacgtccctgaaatcatagag
ttaataggaaaccgcaagaaatatggtggttcctatagtgcagtaaatggcagaaagcac
attgtggtttgtggtcacatcacgctcgaaagtgtttccaacttccttaaagacttccta
cacaaggacagggatgatgtcaatgtagaaattgtttttcttcataatatttcccctaat
cttgagctggaagccttgttcaaacgtcacttcactcaggtggaattctatcaaggatcg
gtcctaaacccccatgatctggcaagagtaaagatcgagtcagcggatgcttgcttgatt
cttgcaaacaaatactgtgcagaccccgatgctgaagatgcctccaatatcatgagagtc
atatctatcaagaactaccatccgaaaatcagaattatcactcagatgctgcagtaccac
aacaaggcccatctgctaaacattcccagctggaactggaaggagggtgatgatgcgatc
tgcctggccgagctgaaggcgggctttattgcccagagctgcctggcacagggcctgtct
accatgctcgccaacctcttctccatgaggtcatacatcaagatcgaggaggacacgtgg
caaaagtattatctggagggagtggctaatgaaatgtacactgagtacctgtccagtgcc
tttgtgggactttcatttcctacagtttgtgagctgtgctatgtgaagctgaagttgttg
ttgatcgctattgaatacaagtcagagcagagggaaagcagtattctgatcaacccggga
aatcacgtcaagatgcaggaggggacgctgggattctttatcgccagcgatgccaaagaa
gtgaaaagagcttttttctactgcaaggcttgtcacgatgacatcacagatccaaaaagg
ataaaaaagtgtggctgcaagagaaccaagatgtccgtctacaagcgaatgaaactggca
tgttgttttgattgcgggcgctctgagcgcgactgctcgtgcatgtcaggcagtgtacat
agtaacatggacagtcttcagagggcgttcccactttcttctgtctctgttcatgatttc
tcaaccagtttacgtgcctccaaatataaatttaacggatatatcagatcaccagatggc
gctacaactccaggaaaaatgggatcggagaggcagtctggggttcggttcaaagctgaa
tgcgctttagtcgaagatgagcatccatcaacactgtcacccaaaaagaagcagcgcaac
ggaggcatgcgaaattcaccaaactgctcacccaaaatgatgagacacgaccctctgctt
gttccgggaaacgagcaggttgaaaacatggatgctagtgtgaagagatacgactccact
ggaatgtttcactggtgtccatccaaagaaattgagaaggtcattctgacacgcagcgag
gcctccatgacagttttaagtggacatgtagtagtctgtatatttggagatgtcacgtca
gcgttagtggggctgcgaaacctggtgatgcctttaagagcgagcaacttccattaccac
gagctaaaacccatcgtgtttgtggggtcattagactatctgagaagagagtgggaaacc
cttcacaacttccccaaagtctccattttacctggtacgccattaagtcgagctgattta
agggccgtcaacatcaacctctgcgacatgtgcgttatcctgtcagccaatcagaacaat
atcgacgatgcttcactgcaggacaaagaatgcatcttggcgtctcttaacatcaaatct
atgcagtttgatgacagcatcggagtattacaggctaattcgcaaggtttcacacctccc
ggtatggacaggtcatctccagaaaacagtcctgtgcatggcttagtgaggcaggcgtcc
gtcaccaccggatcaaacatccccatcataaccgaactcgctaagcctggcaaactactg
cctttggtttcattcaatcaggaaaaaaacactggaaccaacatacaaatgataacagaa
ctggtgaatgactccaacgttcagtttttggaccaagacgatgatgatgacccagatacg
gagctgtatctgacccagccgttcgcctgcggtacagcgtttgcaatcagcgtactggac
tccctgatgagtgcgacatacttcaatgataatatcctcaccctgatccggacgttggtc
acgggaggcgccactccggagctggaggccctgttggcagaggagaacgctctgagaggt
ggctacagcacgccacagacgctggctaacagggacaggtgtcgggtcgcccagctagca
ttgtacgacgggcccttcgcagacttgggggacggtggctgctacggagacttattttgt
aaagcattaaaaacgtacaacatgctgtgcttcggcatctatagattacgagatgcacac
ttaggtgcgccaagccagtgtatgaaaagatatgtcatcacaaacccgccttacgagttc
gagctggtgcccacggatctgatcttctgtctgatgcagttcgaccacaacgctggccag
tccagagcgagtctgtcccactcttcccattcctcccattcatccagcaagaagagctca
tcggtccactccatcccccccacaaaccggcaaaaccgcagcagcaaagcacgcgaagca
cgtgacaaacagaatgcaacaaggatgaatagaatgggcccagaaaagagatggtttaca
gatgaagcagaaaacgcgtacccgaggaacattcaaatcaagcccatgagcactcacatg
gccaaccaaatcaatcagtacaaatccactagcagtctgattccacccattcgagaagtc
gaagacgaatgctga
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