Paramisgurnus dabryanus (large-scale loach): 135787628
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Entry
135787628 CDS
T10799
Name
(RefSeq) toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04145
Phagosome
pdab04217
Necroptosis
pdab04620
Toll-like receptor signaling pathway
pdab04621
NOD-like receptor signaling pathway
pdab05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
135787628
09143 Cell growth and death
04217 Necroptosis
135787628
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
135787628
04621 NOD-like receptor signaling pathway
135787628
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
135787628
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135787628
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
pdab04054
]
135787628
04090 CD molecules [BR:
pdab04090
]
135787628
00536 Glycosaminoglycan binding proteins [BR:
pdab00536
]
135787628
Membrane trafficking [BR:
pdab04131
]
Endocytosis
Phagocytosis
Toll-like receptors
135787628
Pattern recognition receptors [BR:
pdab04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
135787628
CD molecules [BR:
pdab04090
]
Proteins
135787628
Glycosaminoglycan binding proteins [BR:
pdab00536
]
Hyaluronan
Cell surface receptors
135787628
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_5
LRR_14
LRR_1
LRR_9
LRR_6
LRR_NXF1-5
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
135787628
NCBI-ProteinID:
XP_065153634
LinkDB
All DBs
Position
20:complement(23324837..23327495)
Genome browser
AA seq
817 aa
AA seq
DB search
MNYFSLSAFIMMFISVGAGESCTQITENLNYSCMGRNLSYIPASIPSSVQTLDFSFNVLR
YLQKTLFPVFSFLQVLDLSRCNIIHIEDDAFYNVKNLTALILTGNPVTHYGVDCFNILHN
LQRLILVDVGLTSLQFHMNNLTKLQELKVGTNNLQSMTLPAFMSSFTDFSVYDLHANNIS
IIKSDHTIVLRETGRNMTLILCRNPLLYIEPGAFKDIYLRELDIRSAFVSSAAQELGLKA
LYGLHVRRLILGNYEGTYSFESLDNELLDGICSIYFQEIYYYTSERPDKQIPIFQCMVNA
TNITVKRAYIPQMEYVRFHKLKDLYLISSLLLALPGQQLSHLHTLERLVITDSAHIRGCT
FTDMPKLQYLDLSSNKLTFDCCITLLSGTPQLKYLNLSLNAEIGFRLGGFDGLESLEILD
IHHTRVLDIGHFSLLSNLKDLRYLDLSFSSITFANIYCFFGLISLNVLKIAGNSFHSDVS
RYLFNNLTHLEYLDMSYCHIDKLHPSSFKDLRRLKILHLSGNKLMTIDFLTNTNLKKLTS
VYLNQNSITSISLDVLQKLPTNLSVFGLSFNPIDCSCTHTDFILWIINHQQMLDQPHNML
CKTPSPSSDFTVTDFDIDSCVHRTKLTIVLLICFVLVVAVLSVLVYRFQFYLKYSCVLLR
GYRSARQQEFVYDAFVIFSSYDEMWVMNELMENLENGVPPIQLCLHMRDFEAGKSITSNI
IDEGIMGSRKVIVVVSQHFINSDWCRFEFEIAQSWFVMERNANIIIIILEDVEERKTKKV
FGLHKHLKKNTYLKWSRDPLSKMRFWIRLRKAIIATK
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaattacttttctctaagtgcttttatcatgatgtttatttctgtaggtgctggagaa
tcatgcacacaaattactgagaatctgaattactcgtgtatgggaagaaacctcagctat
ataccagccagtataccctcctctgttcaaacactggatttcagttttaatgtcttgaga
tacttacaaaagactttattcccggttttctcctttctgcaagttcttgatctgtcaaga
tgcaacatcatacacattgaagacgatgctttctacaatgtgaagaatttgacagctttg
attctcactgggaaccctgttacacattatggagttgattgctttaatatcttacataat
ctacagcgactgattcttgttgatgtcggtctcacttccctacagtttcatatgaacaat
ctgaccaaactacaggaacttaaagttgggacaaataaccttcagtccatgactctccct
gcattcatgagcagttttacagacttcagtgtatatgatctacatgctaataatatatcc
atcataaaatctgatcacaccattgtactgcgagagactggcagaaacatgacattaata
ctctgtaggaatcctttattatacattgaaccaggagctttcaaagacatttatctgaga
gagctggatatacgatctgcatttgtttcatctgctgctcaagaacttggtctgaaagct
ctttatggacttcatgtcaggagactaatattgggaaactacgagggcacgtatagcttc
gaatcattggataatgagcttttagatggcatttgctctatttattttcaggagatatat
tattacacatcagaaaggcctgataagcaaattcccatttttcagtgcatggttaatgcc
acaaatataacagtaaaacgtgcttacattcctcaaatggagtatgtgcgttttcataaa
ctcaaggatctttatttaatttccagtttattattggctttgcctggtcaacagctttca
catctccatactttagaaagacttgtgataacagactctgcacatatccgcggttgcacc
tttactgacatgcctaaacttcagtatctggatctgagctctaacaaactgacattcgat
tgctgcataacactgctgtctggcacacctcaattaaaatacttgaatttgagtctaaat
gcagaaatcggatttcgcttgggaggatttgatggtcttgaatcccttgagattttggat
atccaccatacaagggttttagatattggacacttttcacttttgtctaacttgaaggat
ttgaggtatctggatttgtccttttcaagcatcacatttgctaacatatactgctttttt
gggctgatcagtctgaatgttcttaagatagctggtaatagttttcacagtgatgtgtca
agatatttatttaataatcttacacatttagagtatcttgatatgtcgtattgccacatt
gacaaattacatccaagctctttcaaagatcttcgaaggcttaagattttacatctcagt
ggaaacaagttaatgactatagattttctgaccaacacaaatctgaagaaattaacatca
gtttatctaaatcaaaacagcattactagtatctcacttgatgttctccagaagttgccc
acaaacctttcagtgtttggtttgtcctttaaccccatcgattgctcctgcactcacaca
gattttattttgtggatcatcaatcatcagcagatgttggatcagccacataacatgtta
tgtaaaaccccttcaccgagctcagattttacagtaactgattttgacattgacagctgt
gtgcacagaaccaaactcacaattgttttattgatatgttttgtgttggtagtggctgtt
ttatcagtcctagtttataggtttcagttttatctgaaatactcctgtgtactactgaga
ggttacaggtcagccagacaacaagaatttgtctatgatgcatttgtgattttttcaagc
tatgatgaaatgtgggtcatgaatgaactgatggaaaatctggagaatggagttccacct
attcagctttgccttcacatgcgggactttgaagccggaaaatccatcacctccaacatt
attgatgaaggaataatgggtagccgtaaagttattgtggttgtgtctcaacacttcatt
aacagtgactggtgtcgctttgagtttgaaatagctcagtcctggtttgtgatggaacgc
aatgccaacatcatcatcatcattctggaagatgtggaggagaggaagactaagaaagtg
tttggtcttcataaacatctgaagaagaacacatacctgaagtggagtagagacccgctg
agtaaaatgagattctggattcgactccggaaagcaattattgccacaaaataa
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integrated database retrieval system
