Paramisgurnus dabryanus (large-scale loach): 135787762
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Entry
135787762 CDS
T10799
Symbol
fanci
Name
(RefSeq) Fanconi anemia group I protein isoform X1
KO
K10895
fanconi anemia group I protein
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
135787762 (fanci)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdab03400
]
135787762 (fanci)
DNA repair and recombination proteins [BR:
pdab03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
135787762 (fanci)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S1
FANCI_S3
FANCI_S2
FANCI_HD1
FANCI_S1-cap
CSTF2_hinge
Motif
Other DBs
NCBI-GeneID:
135787762
NCBI-ProteinID:
XP_073669366
LinkDB
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Position
23:complement(19159452..19176204)
Genome browser
AA seq
1333 aa
AA seq
DB search
MSKMKVTVDKIISLSEEDGVDELQKHLALLSDDQLTSMVTNSALKGKDTGVLIKAIFKGS
PVSVSHGANRRLLVYKHCIPLCESGDLQPEVASDIIGLLMLETHSLPGDALAAIGSLYVE
AIKVGEMNNGRSLELFPTVLTALAATEALAYGKGELSGDEYKKQLINSLCSSRWDPQCVI
HLTTMFRDVPLSAEELQFLIEKILRMFLKLDLQEIPPLVYQLLLLSSKGCKKLVLDGVIN
YFKKQDQLQKEEQKNGESEDVEVQTIPQDQLRHVEGTVILHIVFAVRLDHELGREFFKSL
KASQSDPLCPFSIALLLSVARIQRYEEQVFEFLKVAITKNFKDDQIQQSSKFLQDLLPQC
NSVSDMILDTVKNSVFGWDHVTQGLVQLGFMLMDSFGPKAGVFGKVTDVVSAVAKTPNQL
ACRLGGEVLLESFKMHEPIRGEILEQVLNRLVTKTASPVTHFIELLSSIVMSAPMILLES
SSKVTETFDQLSYLPLSTVQGLLKAVQPLLKVSMSIKDALILVLRKAMFSSHLDGRKAAV
AGFLLLLKNFRVLGSLASSQASQAITSSQVQADVHSRYNAAANEAFCLEILSSLRRCLNQ
QADVRLMLYEGFHEVLRRNSQLASSIMQTLLSQLKRYFEPEQDLLPPLKLESCISAHGDQ
VFLQEPLAHLLCCTVHCLLWYQNVRTGGGLNDGDEEDDEDDEGGVQNELHGILESITKRM
IKSELEDFELDKCAEFSTSSSVGVKNSIYAVLVMGVNEVLMEYNFITANYSKNRIEEVLE
LFKRYHKVSEILREKAGKGRTQSSKTPRSLLSLSFVSTLLTALFRDSTQSREESLSVLRS
SGEFMRYCVSVALQKIQQLEETGHTDGPEGQSSDKTFRHLCDITSVLLWRYTNVPSTVED
AGKKEKGHSVSLLCLEGLLRVFTTVVQRYPIQMGIFLSSLDISGDGEGEGTDLTEQTAFY
IRQFQRALMTQLSSGEEEFNTKEAQLLVNILSVLSRQLNPTSQQFLQMITWTVKLCKETN
FEDISFSKGLLSLLFSLHVLYKSPVSLLWEMCQDIHSQLGDIDQDVEVEKQSHFAIVSMK
TASSTTLLVLTQVGKVLDEVDWLIAKKKAQISSDKTISGNTQQPPGQQDSIEKAVTIQLG
TLLTALHELVQTALLPGPCTDTLMRELSRTYCILTTLTKYYIQLCATQPGQLPARLEKLV
KLSGSHLTPQCYCFITYVQSGELTAGGSEKTKKKKKEDEAVAAASAKVLRETKAIPNLIF
NIEQYEKFLILLSKKSKVNLMQYMKLSTSRDFRINTATLEAALQEQEQDQSQQTESSQAS
EGTQAPKKKRRKQ
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagatgaaggttacggtggataagataatttcgctgtcagaggaagatggtgta
gatgagcttcagaagcatctcgccttgctgtctgacgatcagctcacatccatggttact
aatagcgctttaaagggaaaggacacaggtgtcctgattaaagctatttttaaagggtca
ccggtgagtgtttcacatggtgcaaaccgcaggctgcttgtgtacaagcattgtattcct
ctctgtgagtctggggacctgcagccagaagttgcctcggatatcatcggtcttctgatg
ttggagacacacagtctgcctggtgatgcgttggcagctatagggtctctatatgtggag
gccattaaggtgggtgagatgaacaatgggagatcgctggaactcttccctaccgtcttg
actgctcttgctgctactgaagcattggcttatggcaaaggtgagctgagtggagatgag
tataaaaaacagctgatcaacagtctttgttcgagcagatgggatccacagtgtgtaatc
caccttaccaccatgttcagggatgttccattgtctgctgaagaacttcagtttttaatt
gagaagattctgcgcatgttcctaaagttggatctacaggagatcccacctctggtctat
cagctactactgttgtcctcaaagggttgtaagaaactggttttagatggagtcatcaat
tacttcaaaaaacaagaccagctacaaaaagaggagcagaaaaatggagagagtgaagat
gtggaggtacagaccatcccgcaggatcagctgcgccacgtggagggaaccgtcatcctt
cacatcgtctttgcagttcgtctcgaccatgagctcggcagggagttttttaaaagcctc
aaggcttcccagagcgacccattgtgtcctttcagtatcgcactactgctctcagtggct
cgaatccaacggtatgaggagcaggtatttgagttcctgaaggtcgccatcaccaagaac
ttcaaggacgatcagattcaacagagctccaagtttctgcaggatctgctgcctcaatgt
aacagtgtctcagacatgattttagacactgtgaaaaacagtgtgtttggctgggaccat
gtcactcagggtctggtgcaactgggatttatgcttatggattcctttgggcctaaagcc
ggagtgtttgggaaggtcacggatgtggtgtccgctgtggctaaaacgccaaaccagctg
gcatgtcgacttggtggagaagttctcttggagagtttcaagatgcatgagccaatcaga
ggggaaatccttgaacaggtcttaaaccgactggtgaccaaaacagcctcccctgtcact
cattttatcgaacttctttccagcattgtgatgtctgctcccatgatcctcttggagtcg
tcctccaaggtcacagaaacatttgaccagctttcatacttgcccctcagcacagtacag
ggtcttctcaaggctgtgcagccgctgctcaaagtaagcatgtccattaaagatgccctc
atcctggtcctccggaaggccatgttttctagtcatttagatggacgcaaggcagctgtg
gccgggttcctgttgctactgaagaacttccgggttttggggagtttagcttctagccag
gctagtcaagccattacatccagccaggtccaggcagacgtccactcgcgttacaacgcc
gcagcaaacgaagccttctgtctggagatcctgagcagcctgcgtcgatgtctcaaccag
caggccgatgtgcggctcatgctatatgagggtttccatgaagtcctccgtcgaaactct
cagctggcgagctccataatgcagacgctcctatcacagctaaaacgctacttcgaaccc
gagcaggatcttcttcctcccctgaagctggagtcttgtatcagtgcacatggagatcag
gtcttcctccaggagcctctggctcacctgctgtgctgcactgttcactgcctgctgtgg
taccagaacgtacggaccggtggcggcttgaacgatggcgatgaggaagacgatgaagac
gatgagggtggagtccagaatgaactgcatggcattctggaaagcataacgaaacgaatg
attaaaagtgaactggaagatttcgagttggataagtgtgccgaattttcaacaagttcc
agcgttggggtgaagaacagcatctatgctgtgctggttatgggagtgaacgaggtcctc
atggagtacaacttcatcactgccaattacagtaaaaaccgtattgaagaagtcctggag
cttttcaagcgctatcataaggtgtctgagatcctgcgggagaaagcgggaaagggccgc
acgcaatccagcaagactcctcgtagcctgctgtctctgagctttgtctcaacactgctc
actgctctgttcagagacagtactcagagtcgtgaggagagtctgtcggtgttgcgctcc
agtggagagttcatgcggtactgtgtgagcgtagcccttcagaagatccaacagctggag
gagacgggacacacggacgggcccgagggtcagagctccgacaagactttccgccacctt
tgtgacatcaccagcgtgctgttgtggcgctacaccaacgtgccatcgaccgtggaggat
gctggaaaaaaggaaaaaggccacagtgtgtctctgctgtgtctggagggtcttcttcga
gtcttcactaccgttgtacagcgatacccaatacagatgggcatttttttgtcatctctt
gacatttcaggggatggagagggcgaggggactgatttgacagagcagactgctttctac
atccggcagtttcagcgggctctcatgactcagctcagcagcggagaggaggagtttaac
actaaagaagctcagttattggtcaacatcctcagcgtgttgtcacggcaactcaacccc
acctctcaacagtttctccaaatgatcacctggacggtgaaactctgcaaagaaaccaat
tttgaggacatatcctttagtaagggtttgctgtcgctgctattcagcctgcatgttctc
tataaaagccccgtgtcgctgctctgggagatgtgccaggatatacacagccaactagga
gatatcgaccaggatgtagaagttgagaaacagtctcacttcgccattgtcagcatgaag
acggcatcatccactacacttttagtcttgactcaggttggaaaggtattggatgaagtc
gactggttgattgccaagaagaaagctcagataagttcagacaaaaccatttcaggaaat
acccagcagccaccgggccagcaggactcaatagagaaagcagtaaccattcagttgggg
acgctgttgacggctctgcacgagttggttcaaaccgccctgcttccaggaccatgcaca
gacacactgatgcgagaactcagccggacatattgtatcctgactacccttaccaaatat
tatattcagctatgtgcaacccagcctggccagctccctgcacgcctggagaaattggtg
aagctgtcaggatctcatctcactcctcagtgttactgctttatcacatatgtacagagc
ggagagctgacagcaggaggatccgagaagaccaagaagaagaaaaaagaagacgaggca
gtagcggctgcttcagctaaagttcttcgtgaaactaaagccataccaaacctcattttc
aacattgaacagtatgagaaatttctcatccttctctccaagaagtcaaaggtcaatctg
atgcagtacatgaagctcagcacctccagagatttcagaattaataccgccaccctggaa
gctgcactgcaggaacaagagcaggatcaaagccagcagactgaaagttcacaggcttca
gagggaacgcaggcacccaagaagaagaggaggaagcagtga
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integrated database retrieval system
