Paramisgurnus dabryanus (large-scale loach): 135787828
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Entry
135787828 CDS
T10799
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdab04131
]
135787828 (lingo1a)
Membrane trafficking [BR:
pdab04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
135787828 (lingo1a)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
135787828
NCBI-ProteinID:
XP_065153811
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All DBs
Position
23:complement(21064973..21181563)
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AA seq
615 aa
AA seq
DB search
MVAGEVSGHSFLVACWQPILILMLGTVLSGSATGCPSRCECNVQERAVMCHRKKLMSVPE
GIPLETRLLDLSKNRIKTINPDEFSTFPHLEELELNENTISAIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTSVPTEAFTHLHSLVTLRLRNLNINSIRDYSFKRLYRLKVLEIA
NWPYLDTMTTNCLYGLNLTSLTITNANLTTIPYLALRHLVYLRFLNMSYNPIQIIEGNRL
HDLLRLQEFHLVGGRLMMIEPYSFRGLNYLKILNVSSNALTTLEESVFHSVGNLETLALY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCSSPEFVQGKEFKDFPDVLQPNYFTCRKSRIR
DRKPQHKFVDEGTTIHFVCQADGDPTPVILWMSPQKQFITTKTIGRLTVFPDGTLEVRYA
QIQDNGTYVCIASNAGGNDTALAHLHVHSYSPDWPSQPNKTLAFISNQPVDNGANGTKAT
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNSKHNIEIEYVPRKSDAGMS
SSGADAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtagctggggaagtgagtgggcacagcttcctggtggcatgctggcagcccattctg
atcttgatgctgggcacggtgctgtctggctccgccacagggtgcccgtcacgctgcgag
tgcaatgttcaggagcgcgctgtcatgtgccaccgcaagaagctgatgtccgttccggag
gggatcccactggaaacaagactcctggacctcagcaagaatcgtatcaaaaccatcaac
ccggatgagttctccaccttcccgcacctggaagaattagagctcaatgaaaacaccatc
tcggccattgagcccggtgcttttaacaatctctacggcctgcggactctgggacttcgc
agcaataagcttaagcttattcagctgggggtgtttacagggctcagtaacctaacaaag
ctggatatcagtgaaaataagatcgtaattctgctggactacatgtttcaagacctgtat
aacctgcgttctcttgaggtgggggataatgacttggtcttcatatcccaccgggcgttt
catggcctcagcagcttggagcagcttacgctagaaaagtgcaacctgacctctgtcccg
accgaggccttcacgcaccttcacagcttggtcacgctgcgtttacgtaacctcaacatc
aacagtatcagagactacagttttaaacggctctaccgcctcaaagtgttggagattgcc
aactggccctacttggataccatgaccaccaactgtttgtatggattgaacctaacatcc
ctaacgattactaatgcgaacctgactacgattccctacttggctttgcggcatctggtt
taccttcggttcctcaacatgtcatacaatcccatccagataattgaagggaaccggctt
catgacctactcaggctgcaggagtttcaccttgtgggtggccggctgatgatgatagag
ccctattccttcagaggattgaactacttaaaaatactcaatgtctccagcaacgccctg
accaccctagaggaatcagtattccattcagtgggcaacctggagaccctcgcgttgtac
gataacccactggcttgcgactgccgcctgctctgggttttccggcgccgttggaggctc
aactttaaccgccaacagcccacttgctcctcccccgagtttgttcagggtaaagagttt
aaagacttcccagatgtccttcagcccaattatttcacttgtcgtaaatcaagaatccga
gaccgcaagccgcaacataagtttgttgacgaaggcaccaccattcacttcgtgtgccaa
gcagatggagacccgacacccgtcatcctttggatgtccccacagaaacagttcatcacc
accaaaacgataggacggctcactgttttcccagacggaactctggaagtgcgttacgct
cagattcaggacaacggtacatacgtatgcattgccagtaatgcaggtggaaatgacaca
gctttggcccacctgcacgtccacagttactccccagactggcccagtcaacccaacaaa
accttggcgtttatctccaaccagcccgttgataacggagccaatggaacgaaagcaacc
gtccccttcccatttgatataaagacgctaatcattgccaccacaatgggtttcatctcc
ttcctgggtgtagttctgttctgcctggttctgctttttctgtggagcagaggtaaaggt
aacagcaaacacaacattgagatcgagtacgtcccacgcaagtcggacgctgggatgagc
agcagcggcgcggatgcccctcgaaaatttaacatgaaaatgatataa
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