Paramisgurnus dabryanus (large-scale loach): 135787930
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Entry
135787930 CDS
T10799
Name
(RefSeq) putative ATP-dependent RNA helicase TDRD12
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
Enzymes [BR:
pdab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
135787930
Chromosome and associated proteins [BR:
pdab03036
]
Eukaryotic type
Gene silencing
piRNA pathway
135787930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
135787930
NCBI-ProteinID:
XP_065153916
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MLKESNPPETTSQDVQGCLKIRGFPLEIGEMLEIQIIKIEDPGCLWGRVLKGPGIQPDVP
EEYDNLRVKMNLFYHEINLDVKKLKPAELKEGMVCVVFSPVRKIWCRAMVESLFQGTAGS
QAMCFLVDYGDHVNVKTDDVRTPLEKFLQLPFRVRRFKLAGIRPMTLQVSIYNDNAELVP
SSVWDSSATKYLHNLLQVSTLVEAVLCETNADCSSVELYLTIKNTKICVNHELVVKKFAC
FWSEQSSTMESDGDCAPVSLAWDIYSSPHQLLDMNGCCPVKAPPTDIFITKERKEEPQTE
NGEQEPQVLEKGQQDPQVLEHTHKPSNVKLSKVPELAHNVGTYTIGRGWRIRAEATDIYT
DKPAAQLQYKRFLESISPSQQVSKSDGENPSSPDVTDSENSSAPEQEENQSLCSSGSSEK
PDEAALSQEPSLDDQLACSRLLQFLNPDPLNLDQEQSEGKVVRSNPGHAGVLVHSALPVN
PCSSLTRAPISEHFRKFLLWKKYTGPNVGESYCWPAVARGCDMVLVSQTGDNPLSYIPPL
LMHLQVVSVVSNIAARIGPVAVILCPGWEKVQTVLDLLEESKATHNLHPTSVLLGVDQNE
PKKIKIQRNCQLLVTTPFTMMRLLDAQCFLFLRLCHLVLDEVNVLYSQAPEQLTVILKHF
QKVVSGEERASCPRQIIAVGSRWIAGMEGLVRDYMIYPSIIITVMEEAALYGSVHQTVHL
CLDCDKISVLLSFLDLHPSKPQKTLIITNSPEDTEHVYKAVVNTAVFTLKAHEDATDQFD
FVNDQWRKDIGPGTQVVLVTTNDCLKPLGIRDATRVVHYGFPSSPKLFGSRLFCMSENFR
NISEPDHSESSSPAAQSVMLLSEQNARHVCGVLRYLRRAGALLPPELLQFALGVQHAKEE
QKANRPLCCSLKSFGFCRDNVICQDRHTINNTLDHPLHPDSGSVMVLPLSIKTASVYYGR
VTRQKDDAYETLAAQMKTHYSNERRCAVDVVVGELYAIQEEDLYNRVRVIEMPDKGERMF
SSVIAYFVDEGRTQEVKSHQLLQLPPQFQELRDQAVEIILCRAQPIDGEVDWNPKVTRAI
SQKIKGKLHQAKVVMCVGNAVWVDPMVRMTRVPGLKTYINEYNVHAEILASGFGVNNPQH
LDLLKRVFHGEDNPTPMDQHQSDRLEDSSVSSQLKDHNTEELCRTSEGPALVHDVLKNTD
VENSSEANMKIMSPSALNGFSSSNQSRSSSPEPDDHIIKDDILIVKELQTVNILKNLNNS
GIISSQPTSFHPQIKWFQRAEFITVSVKLISPVMQKCEFYSDTLIYSGYVNERHYFAKLE
LFSDIITEECSWEMKCNEPVMKLRKKENKDWKTLLKHKSSFVSYEFDHIDDVVVSTVNGH
LFLADVGEEGYFISSESSSDSD
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaggagtcaaacccacctgaaacaactagtcaagacgttcagggctgcttgaaa
attagaggttttcctttggaaatcggagaaatgctagaaatacaaataatcaagattgag
gatccaggatgtctgtggggtcgggttcttaaagggcctggcattcagccggacgttcca
gaggaatatgacaacctgagggttaaaatgaatctcttctatcacgagattaacctggat
gtaaagaaattaaaacctgctgaactgaaggaggggatggtctgtgtggtgttcagcccg
gttcggaagatttggtgtcgggctatggtggagtcgctctttcagggaacagcgggtagc
caggccatgtgcttcttagtagactatggagatcatgtgaacgtcaaaacagatgatgta
agaactcctcttgaaaagttcctgcagcttcccttcagggtgagacgctttaaactggct
ggaatccgtcctatgacactacaggtgtccatttacaatgataatgctgagcttgttcca
tcttctgtatgggacagctctgccacaaaatatctgcacaaccttttacaagtgtccact
ctggttgaagccgttctgtgtgaaacaaatgcagattgctcttctgttgaactctacctg
actattaaaaacacaaagatctgtgtgaaccatgagctcgtggtgaagaagtttgcatgt
ttctggagcgagcagtccagtacgatggaaagcgatggagactgcgctccggtcagcctg
gcgtgggacatctactccagtcctcatcagctcttggacatgaatggctgttgcccagtc
aaagctccacccactgacatcttcatcacgaaagagaggaaagaggagccacagacagaa
aatggggagcaggaaccacaagtgttggaaaaggggcagcaggatccacaagtattggag
catacacacaagccatctaatgttaaactttctaaagtccccgagctggctcacaatgtt
ggaacatacactatcggtagaggttggcgtatcagagccgaagccactgacatctatacg
gataaacctgcagcacaattacaatacaagaggtttctagaaagtatttcaccttcacaa
caggtttctaaatctgatggagagaatccgagcagtcctgatgtaacagacagtgagaac
agttctgcacctgaacaagaggagaatcaatcactgtgttccagtggctcttcagagaaa
ccggatgaagcagctctctcacaggagcccagtcttgatgatcagctcgcctgttctagg
ctcttgcagtttttgaatcctgatccactaaacctagaccaagaacagtctgagggcaaa
gtcgtgcggtctaatccaggtcacgctggagttttagtgcactccgctcttcctgtaaac
ccttgcagcagcctgacccgagcccccatcagcgaacacttcagaaagttcctgctgtgg
aaaaagtacactgggccgaatgtaggggagagttactgttggccggctgtggcccggggt
tgtgacatggttctggtgtcacaaactggtgacaatcctctttcttatatcccaccactg
ctgatgcacctacaggtggtttctgtcgtgtccaacatcgcagctcgcattgggccggta
gcagtgatcttgtgtccaggctgggagaaggttcagacggtgctggatcttctagaggag
agcaaagcaactcacaaccttcatcccaccagtgtgcttctgggtgtggaccagaacgag
cctaaaaagatcaagatccaaagaaactgtcagttgcttgtgacgacgccatttaccatg
atgagactgctggatgctcaatgctttctattcctgagactctgccacctcgtgctggat
gaggttaatgtcctttattcacaggctcctgaacagctgacagtgatcctgaagcacttc
cagaaagtggtgtctggagaggagcgggcctcatgccccaggcagattatcgcagttggc
agccgctggattgctgggatggagggtttggtcagggactacatgatttacccctctatt
atcataaccgtgatggaggaggctgccctgtatggtagcgtacatcagacggttcatttg
tgtctggactgcgataagatctcagtgctgctcagctttttggatctccacccctccaaa
cctcagaagacccttattatcaccaactcacctgaggacacagaacatgtgtacaaggct
gtggtcaacactgctgtgtttacactgaaagctcatgaagatgcgacggaccagtttgac
tttgtgaacgatcagtggagaaaagacatcggccctggaacacaagttgttctggttaca
accaacgactgtcttaaacctcttggtattagagatgccacacgtgtggtccattatggg
ttccccagctcccctaagctcttcggcagccgtctcttctgcatgtcagagaacttcaga
aacatctcggagccggatcacagcgagagttcatctccggcggcacagtccgtgatgctc
ctgtcagagcagaacgcccgtcatgtgtgcggtgtgctgcgatacctgaggagagccggg
gctcttctgccacctgagctccttcagtttgctcttggtgtccagcatgccaaagaggag
caaaaagccaacagacctctctgctgctctcttaagagcttcggcttctgcagagacaac
gtcatttgtcaggatagacacacaatcaacaatacactggaccatccgctgcaccctgat
tctggatctgtcatggttttgccgctgtccatcaaaacggcaagtgtgtattatggccgt
gttacgagacagaaggacgacgcttacgagactcttgctgctcagatgaagactcactac
agcaatgaaagacgctgtgctgtggatgtggtggttggagaactttacgccattcaagag
gaggatctttataacagggtgcgtgtgattgagatgccagataaaggagaacggatgttc
agcagcgtcatcgcctactttgtagatgaagggcgtacacaggaagtgaagtcacaccag
cttctccagcttcctcctcagttccaggagttgcgagatcaggcggtggagatcattctc
tgcagggctcagcccattgatggagaggttgactggaacccaaaggtcaccagagcaatc
agtcagaaaatcaaaggaaagctgcatcaggctaaagtggtgatgtgtgtaggcaatgct
gtgtgggttgatccaatggtgcgcatgacacgtgtgccgggcctgaagacttacattaat
gagtataatgtccatgctgagatcttggcatctgggttcggtgtcaataaccctcaacac
ttggacctgctgaagagggttttccatggagaagacaaccccaccccaatggatcaacac
cagagtgacaggttagaagactcctcagtgtcctcacagctgaaagatcataatacagaa
gagctctgtaggacctcagagggtcctgcactggtccatgatgtgctcaaaaacactgat
gtagaaaactcttcagaggcaaacatgaagatcatgagtccttctgccctgaatggattc
tcatcttcaaaccaatccagatcctcaagccctgaaccagatgatcatataattaaagat
gacatactgattgtaaaggaactacagactgttaatatactgaaaaacttgaacaattct
ggcatcatctcatcccagcctaccagttttcacccacagattaaatggtttcagagagct
gagttcatcactgtctctgttaaactcatcagtccagtgatgcagaagtgtgaattttac
tccgacacactcatttacagtggttatgtgaatgagcgtcattactttgcgaagcttgag
ctgttcagtgacatcatcacggaggagtgctcatgggaaatgaagtgtaacgagcctgtg
atgaagctgaggaaaaaggagaacaaagactggaaaacacttcttaagcacaagagttca
tttgtcagctatgaatttgaccacattgatgatgttgtggtttctacagtaaatgggcat
ttgttcttggcagatgtgggtgaggagggctatttcatcagctcggagtcctccagtgac
agtgattga
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