Paramisgurnus dabryanus (large-scale loach): 135788017
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Entry
135788017 CDS
T10799
Symbol
amfra
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Pathway
pdab04137
Mitophagy - animal
pdab04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
135788017 (amfra)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
135788017 (amfra)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pdab04121
]
135788017 (amfra)
Enzymes [BR:
pdab01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
135788017 (amfra)
Ubiquitin system [BR:
pdab04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
135788017 (amfra)
Multi subunit type E3
ERAD complex
135788017 (amfra)
LMBR1L-GP78-UBAC2 complex
135788017 (amfra)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_Vps41
zf_RING_Vps8
zf_RING_Vps8_fungal
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
135788017
NCBI-ProteinID:
XP_065153987
LinkDB
All DBs
Position
23:26226196..26240089
Genome browser
AA seq
624 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSSVLLAGSILSAYSTVRDPEFSTPLTEDAHTESNEEIKLD
HLENLGNLVTSVLLYLITDTLFVWVMVNTACCILMLIAKVIQRIVFGPLRVSEKQHLKDK
FWNFIFYKFIFIFGVLNVQRVEEVVLWCLWFSMLIFLHLMVQLCKDRFEYLSFSPTTPMS
SHVRVLTLLVSILACCGGLAVLCVIVGHLHSAHTVAFMTAECMLVTVRTGHVIIRYSIHL
WDLNHEGTWENKSSNIYYTDFILELVILCLDLMHHIHMLLFGNIWLSMASLVIFMQLRYL
FHEVQRRIRRHKNYLRVIDNMESRFAVATPDELVANNDDCAICWDSMTTARKLPCGHLFH
NSCLRSWLEQDTSCPTCRMSLNINEGGRERQEGQRGPLDETVAAGPGADARQHLNQHNHF
FHFDGSRIASWLPSFSVEVMHTTNILGIAHANNSQLNAMAHQIQEMFPQVPYHLILQDLQ
LTRSVEVTTDNILEGRIQVPFPTQPVERSPIQVNPASEESAGSSSNSEVTAPAPEDFEVR
GSRFSKSADERQRMLMQRKEELLQRARRRYLIKKPDEGDLSSSADYDEDPPSIEDEDSDW
VTLRRRRLAAAAERRMHRQTDPPL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgctgtttttggagcggttcccttggcccagtttacagacatacacagccctg
agctcggttctgcttgctgggtccatcttaagtgcctacagcacagtcagagacccagag
ttctccactcccctgacagaagacgcacacactgaatccaatgaggagatcaagctggat
catctggaaaaccttggaaacctggtcaccagtgtgttactttatctcatcacagacact
ctgtttgtctgggtgatggtgaacactgcatgctgcatcctcatgttaatagctaaagtg
atccaacggattgtttttgggccactgagggtcagcgagaaacagcatctgaaagacaaa
ttctggaacttcatcttctacaagttcatcttcatctttggtgtcctgaatgtgcagcgg
gtggaggaagtggtgctctggtgtctgtggttctctatgctcatcttcctccatctgatg
gtgcagctctgtaaagaccgctttgaatatctctcattttctcccaccactccgatgagc
agtcacgttcgcgtcctgactcttctggtgtcaattctcgcatgctgtggaggtctagca
gtgctctgtgtaatcgtcggccatcttcacagcgcacacacggttgcttttatgacggct
gagtgtatgttggtgacggtacgcacgggacacgttatcatacggtactccattcacctg
tgggacttaaaccatgagggcacctgggagaataagagctcaaatatctactacacagac
ttcatcttggagttggtcattctctgcctggacctgatgcatcacatccacatgctgctc
tttggtaacatctggttgtccatggccagtctggtgatcttcatgcagttgcggtatctc
tttcacgaggtccagaggagaatccgcaggcataaaaactatttgcgtgttattgataac
atggagtccaggtttgctgtggcgacacccgatgagcttgtggctaataatgacgactgt
gccatctgctgggattcaatgactacagcacgcaagctgccatgtggacacctgtttcac
aattcctgtctgcgctcctggctagaacaagatacttcctgtcccacgtgtcgtatgtca
ctaaacatcaacgaaggtggcagagagcgacaggagggccaaagagggccgctggatgaa
accgtggccgctgggccgggagcagacgctagacaacacctcaaccaacacaatcacttc
tttcactttgatgggtcccgcattgccagctggctgcccagtttctctgtggaggtcatg
cacaccactaacatcctgggcatcgcacacgctaacaactcgcagctcaacgccatggcc
catcagatccaggagatgtttccacaggtcccttatcacctgatcctgcaggacttacag
ctcacacgctctgtggaggtcaccactgataacatactggagggaaggatacaggtgcct
tttccaacacagcctgtggagcgctcacccatacaagtaaaccctgcttcggaagagtca
gccggttccagcagcaattcggaggtcaccgctcctgcgcccgaagacttcgaggtacgg
ggaagtcgcttttcaaaatctgcggatgagagacaaagaatgctaatgcagagaaaagaa
gagctactccaaagagcacgcagacgttatttaattaaaaaacccgatgaaggagacctc
tcctcctcggccgattacgacgaggatccaccttctatagaggatgaagactccgactgg
gtgaccctgcggcgcaggaggctggcggccgcagccgagagacgcatgcataggcagaca
gacccgcctctgtga
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