Paramisgurnus dabryanus (large-scale loach): 135788216
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Entry
135788216 CDS
T10799
Symbol
irx5b
Name
(RefSeq) iroquois-class homeodomain protein IRX-5b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pdab03000
]
135788216 (irx5b)
Transcription factors [BR:
pdab03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
135788216 (irx5b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
BSP_II
Motif
Other DBs
NCBI-GeneID:
135788216
NCBI-ProteinID:
XP_065154172
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Position
23:complement(26264526..26268439)
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AA seq
379 aa
AA seq
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MAFPQGYLYQSSLSLFSCPPHASGAITGPRTHDLGRSSAFAPYASTAFTNTAFNSIQYSS
ESTAPFTSYVGSPYDHSPGVTGSVGFHPYAGALGAYPLGDPAYRKNATRDATATLKAWLS
EHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPRNRSEDEDEEDS
IDLEKNDEDDEPLKTTKTTEITKDSVGDDCSEKLTETHDDADRVTIDCGEHEKRTMRESP
PVATTSSPQNDTSETTKPPSENCKPTSVIHSANPTPKPKLWSLAEIATSDKGCDEPSQTS
GRLSPAGSPVRCPYPPRHLYYTPPGFCPGFTSAFGPLHESNPTHLSGINQTALHRARDSK
LTLEMCQELSFAHIRRQNI
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcatttcctcaaggatatttgtaccagtcttcactctctctgttctcgtgtcctccg
cacgcgtccggggcaatcacgggcccgcgcacgcatgatttgggacgctcgtccgctttc
gccccttacgcgtccacagctttcaccaacacagcctttaactcaatccagtacagctct
gaatctacagcccctttcacttcttacgtgggctccccatacgaccattcgccgggcgta
acgggctctgtgggctttcatccgtacgccggtgcgctgggagcgtacccgctcggagac
cccgcttacaggaagaacgccacgcgagatgccaccgccaccctaaaggcctggctgagt
gagcacaggaaaaacccgtatcccacgaagggtgaaaagatcatgctggccatcatcaca
aaaatgaccctcactcaggtctccacctggttcgccaacgcccggagaagactgaagaaa
gaaaacaaaatgacctggacgccacgaaacagaagtgaggacgaagatgaggaggacagc
attgatttggagaaaaatgatgaagatgatgaacctctcaaaaccacaaagacaacagag
attaccaaagattcagttggagacgactgttcagaaaaactcacagaaacgcacgacgac
gcggatcgtgttacaatcgactgcggggagcacgagaagcggacaatgcgcgagtcgccg
ccggtggccacgacctcatctccccaaaacgacacaagtgaaaccacgaaacccccaagt
gaaaactgcaaacccacatctgtcattcattcagcaaacccgacccctaaacccaaactg
tggtctcttgctgaaatcgctacgtcggataaggggtgtgacgaaccgtcccagacatct
gggaggttatcacccgctgggtcacccgtgcggtgtccgtatcccccgagacatttatac
tacactcctccgggattctgcccgggcttcacgagcgcattcggacccctgcacgaatcc
aacccgacgcatctaagcggaattaaccagactgcgttacacagagcgcgagacagtaaa
ctcactctggagatgtgtcaggaactcagctttgcgcacatcaggaggcagaatatataa
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