Paramisgurnus dabryanus (large-scale loach): 135788939
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Entry
135788939 CDS
T10799
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
pdab Paramisgurnus dabryanus (large-scale loach)
Brite
KEGG Orthology (KO) [BR:
pdab00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pdab01009
]
135788939 (ptprub)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pdab04515
]
135788939 (ptprub)
Enzymes [BR:
pdab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
135788939 (ptprub)
Protein phosphatases and associated proteins [BR:
pdab01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
135788939 (ptprub)
Cell adhesion molecules [BR:
pdab04515
]
Immunoglobulin superfamily
Type II RPTP family
135788939 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
Ig_DSCAM-DSCAML_C
DSPc
Tc-R-P
Pur_ac_phosph_N
Y_phosphatase3
Ig_3
PTPlike_phytase
I-set
Ig_2
ig
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
135788939
NCBI-ProteinID:
XP_065154498
LinkDB
All DBs
Position
13:11955318..12206766
Genome browser
AA seq
1450 aa
AA seq
DB search
MNTCAFLLILAVQIHADSLEGPTAGCTFDEDSDPSLCEFSQGEEDDFDWQLYRAHASPYP
NSDLLRGSYMMVNSSQHAAGQRAQLLLQTLSENDTHCVQFSYFLYSRDGHSPGALRVYVR
VNGGPLGIPVWNVSGSRGRQWHQVELAVSTFWPNEYQILLEATVDRRGYIAVDDILLLNY
PCYKAPHFSRLGDVEVNAGQNATFQCVAAGRPSEAEKFLLERHNGEVSSGGSVKLLGRNR
FSVSFQLEDVQKPEQDLYRCVTQSSRSSGVSNFAELIVKVPPSPIAPPQLLRAGSTYLII
QLNTNSILGDGPIIRREIEYRASQAPWSEILGVSMVTYKLWHLDPDTEYHISVLLTRPGE
GGTGPPGPPLISRTKCAEPMRALRDLRALEIQSRQLILQWETPAFNLTRCHTYSVSLCYR
YTTSGGGGGHNTTVRECLAVEHNVSRFTLRDLPPYHTIQIRLALANTEGKKEGKEVSFQT
EEDVPGGIAPESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSVESSDPGINVPGPRR
TVSKLRNETYHMFSNLHPGTTYLISVRARTAKGFGPTALTEITTNISAPTFDYGDMPSPL
SETDSTITVLLRPAQGRGAPVSTYQVIVEEETVRKVKRELGVQECFPIPTSHGEAQAHGA
PHYYTAELPPSSLPEATPFTVGDNHTYNGYWNSPLDPRKNYLIYFQAMSNFRGETRINCI
RVARKAACKDHQKALEVTQRSEEMGLILGVCAGGLVVLILLLGAIIIIIKKGRDYHSYSY
YPRKPVNMNKTPITYRQEKSNMMGSMERSFTDQSTLQEDERMALSFMDTHTCSTRSDPRS
SMNESSSLLGGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESF
FDGWDINKKKDKTKGRHDTLMGYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYHRSN
HFIATQGPKQETVYDFWRMVWQENCFSIVMITKLVEVGRVKCCKYWPDESEMYGDIKITL
LKTETLAEYTVRTFALERRGYSAKHEVCQFHFTSWPEHGVPYHATGLLAFIRRVKSSTPP
DAGPVVVHCSVGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIF
IHDAILEACLCGETAIPVNEFALAYKEMLRVDSQSNSSQLREEFQTLNSVTPHLDVEECS
IALLPRNREKNRSMDVLPPDRALAFLVTTEGESNNYINAALMDSFHRPAAFIVTPHPLPG
TTSDFWRLVFDYGCTSVVMLNQLNQSNSAWPCVQYWPEPGLQQYGPMQVEFLSMSADEDI
ITRLFRVKNVTRLQEGQLVVCQFQFLRWSAYRDVPDSKKAFLNLLASVQKWQRECGEGRT
VVHCLNGGGRSGMYSASNILMEMIEYQNMVDVFYAVKTLRNAKPNMVETLEQYRFCYELV
LEYLDCLEVR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgaatacctgcgcgtttctcctgattctggccgttcagattcacgccgatagcttggag
ggaccaacagctggctgtacattcgatgaagactcggaccccagcctctgcgagtttagc
caaggggaggaggatgattttgattggcagctgtaccgtgcccatgcttcgccgtaccct
aactctgatctcctgcgtggctcctacatgatggtcaactcctcccagcatgcagctggg
cagagggctcagcttcttctgcagacgttaagtgaaaatgacacgcactgcgtccagttc
agctactttctgtacagccgagacggccacagccccggggcactgcgcgtttatgtgcgg
gtcaacggtgggccgcttggcatcccagtatggaatgtctctggctcgcgtggacgacaa
tggcatcaagtggaactggcagtcagcacattctggcctaatgagtaccagatattgcta
gaggcaactgtggaccgccgaggttacatcgctgtggatgacatactccttctgaattac
ccctgttataaagctcctcatttctctcgtctgggggatgtggaagttaacgctggacaa
aatgccactttccagtgtgtggcggcagggcgtccgtctgaagcggagaagttcttgtta
gagcggcataatggtgaagtttcctctggtggttctgttaagctcttgggccgcaaccgg
ttttcagtgtcctttcagctagaggacgtccagaaaccagagcaggacctctatcgctgt
gtcacgcagtcctccagaagttccggtgtttccaacttcgctgaactcattgtcaaagtg
cccccatctcctattgctccaccccagctgttgagagcgggctccacgtatcttatcatt
cagctcaacaccaactccattctgggcgatggtcccatcattcgccgtgaaatcgaatat
cgggccagtcaggcaccctggtctgaaattcttggagttagcatggtcacctataaactc
tggcacctggacccagatacagagtaccatatcagtgtgctgctcacccgaccgggcgaa
ggggggaccgggccacctggaccacccctcatcagcagaaccaagtgtgctgagccgatg
cgggcgctgcgtgatctcagggctttggagatccaatcccggcagctgattctgcagtgg
gagacgccggccttcaacttgacccgctgccatacgtactccgtctccctttgttatcgc
tacacaacttcagggggtggcggcgggcacaacaccacagtacgagaatgcctggctgtg
gagcacaacgtttcacgcttcaccctcagagacctgcctccttatcacaccatccaaata
cgcctggcgctcgccaatacggagggcaagaaggagggaaaggaggtcagctttcaaact
gaggaggacgttcctggcggcattgctcccgagtctctcacgttcaccccactagaggac
atgatcttcctcaaatgggaggagcctgtggaacccaatggactcatcacacagtacgag
attagctaccagagcgttgaatcatcagatcccgggatcaacgttccaggcccgaggcgc
accgtatccaagctgaggaatgagacgtaccatatgttctccaacctgcaccctggcact
acctatttaatctcagttcgggcccgcactgccaagggtttcgggccgacggctctcact
gaaatcaccaccaacatctcggcccctacatttgattacggagacatgccgtcccctctg
agtgagactgacagcaccatcacggtcctcttacgtccggcacaaggcagaggagctccg
gttagcacgtatcaggtgatcgtggaagaggaaactgtgaggaaggtgaagagagagctg
ggtgttcaggagtgctttcctattccaacatctcacggcgaggctcaggcccacggagct
ccacattactatacagccgaactgccacccagcagcctcccagaagccacaccatttact
gtgggagacaaccacacctacaacggctactggaacagccctctggatcccaggaagaac
tacctcatatacttccaggccatgagcaactttagaggagaaacgaggataaactgcatt
cgtgtcgcacgtaaagctgcctgtaaggaccaccagaaagctcttgaggtcactcaacgc
tcagaggagatgggactgatattgggagtttgtgctggtggcctggtggtcctaatatta
ctgctaggagcaattattataatcatcaagaaaggaagggattaccactcatattcctat
tatcctaggaagcctgtgaacatgaataagacccccattacctacaggcaagagaagagt
aacatgatgggctccatggagcgcagtttcactgatcagagcactctacaggaggacgag
aggatggccttgtcgtttatggacactcatacgtgcagcacacgcagtgatccacggagc
tccatgaacgagtccagcagtctgcttggtggatcgcccaggagacagtgcggacgtaag
ggatcaccctatcacacaggccagcttcatccggcagtgcgtgtggctgatcttctgcaa
cacatcaaccagatgaaaaccgcagagggctatggctttaaacaagagtatgagagcttc
tttgatggctgggatatcaataagaagaaggataaaactaagggaagacacgatacccta
atgggttatgaccgtcacagggtgaaattgcacccgctgctcggggatcccaactctgac
tatatcaacgccaattatatcgatattcggataaacagggaaggttaccatcgatctaac
cacttcatcgccactcaggggcccaagcaggagacggtctatgatttttggaggatggtt
tggcaagagaactgctttagcatcgtcatgatcaccaagctagtggaggtgggcagggtg
aaatgctgtaagtactggccggatgagtcagagatgtacggagacattaagataacgctg
ctgaagacggaaactctggcagagtacacagtgcgaacatttgccctggagcggagaggc
tactctgccaagcacgaagtgtgccagtttcactttacatcgtggcccgagcatggagtc
ccgtaccacgctactggtctgctagccttcattcgccgggtcaaatcctccacaccaccc
gatgcagggcctgtggtggttcactgcagtgtgggagcgggcagaaccggctgctatatt
gtcctggatgtaatgttggacatggctgaatgcgagggtgtggtggacatctacaactgc
gtgaagaccctctgctctcgccgtataaacatgatccagacagaggagcagtacatattc
attcacgatgcgattctggaggcgtgtctgtgtggggagacggccatcccagtgaatgag
ttcgctctggcttataaagagatgctgagagtggattctcagagcaactcctcacagctc
cgagaagagttccagaccctaaactctgtcacacctcatctggacgttgaggagtgcagt
atcgcccttttaccgcgaaatcgggagaagaaccgcagcatggacgttctccctccggac
cgcgctttggcttttctggtgacaactgagggcgagagcaacaactacatcaatgctgcg
ctgatggacagtttccaccgccccgctgccttcatagtgacccctcatccgctgcccggc
acgacctctgacttctggagactggtgtttgactatggatgcacctctgtggttatgctg
aatcagctgaaccagtccaactctgcttggccttgtgtgcagtactggcctgaaccaggt
cttcagcaatatggtcctatgcaagtggagtttctgtccatgtctgcagatgaggacatc
attacccgtctcttccgggtcaaaaatgtgacacgactgcaggaaggtcagctggttgtg
tgccagtttcagttcctgcgctggtctgcatatcgtgatgtgcctgactcgaagaaggcc
ttccttaacctgctggccagtgtgcagaagtggcagagggaatgtggggaaggtcgcacc
gtggttcactgcctgaacggtggaggtcgcagtggaatgtactctgccagtaacatcctg
atggaaatgatagaataccagaacatggtggatgtcttctatgctgtcaagacccttcgg
aacgctaagcccaacatggtggagacactggagcagtatcgtttctgttatgagctggtt
ctggagtatttggactgcttggaggtcagatag
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integrated database retrieval system
