Pasteurella dagmatis: 4362423_00013
Help
Entry
4362423_00013 CDS
T05467
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pdag
Pasteurella dagmatis
Pathway
pdag03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pdag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
4362423_00013 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdag03400
]
4362423_00013 (mutM)
Enzymes [BR:
pdag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
4362423_00013 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
4362423_00013 (mutM)
DNA repair and recombination proteins [BR:
pdag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
4362423_00013 (mutM)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_IS1595
NFACT_N
DZR
Zn_ribbon_3
DUF8259
Zn_ribbon_TiaS
DUF7573
RNHCP
Zn_ribbon_6
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
SNV40699
LinkDB
All DBs
Position
1:9222..10034
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTKNGISPYLEGFIIEKIVVRQPKLRWMVSEELKQITQQKVTGLSRRAKYLI
IHTEQCYIIGHLGMSGSLRIVSPQDTVDKHDHLDIVMNNGKILRYNDPRRFGAWLWTDNL
EEFHLFLKLGPEPLSEEFNADYLWKKSRKKQTALKTFLMDNAVVVGVGNIYANETLFLCG
LHPEKAAGSLTKAQCSQLVEQVKQVLTTAIQQGGTTLKDFLQPDGRPGYFSQKLLVYGNK
DKPCPKCGTKVESLMIGQRNSFYCPKCQKK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgccagagttaccggaagttgaaacaacaaaaaatgggattagcccttatctggagggt
tttatcattgaaaaaattgttgttcgccaaccaaaattacgctggatggtgagtgaagaa
ttaaaacagattactcagcaaaaagtgacaggactgagtcgcagagcaaaatatcttatt
attcacacagaacagtgttatatcattggacatttgggtatgtctggctcattgcgtatt
gtatctcctcaagatacggtcgataaacacgatcatttagatatcgtgatgaacaatggt
aagatcttacgttataacgatcctcgtcgttttggtgcgtggttgtggacagataattta
gaagaatttcatctgttcctaaaattaggacctgaacctctttctgaggaatttaatgcc
gattacctttggaaaaaaagtcgcaaaaaacagaccgcacttaaaacctttttaatggat
aatgcagtggtggtgggcgtaggcaacatttacgccaacgaaactttatttttatgtgga
ttacaccctgaaaaagcagcaggaagtctcacgaaagcacaatgttcacaacttgttgag
caagtcaaacaagtactaacaactgcaatccagcaaggtggcacaactttaaaagatttc
ttacaacctgacggacgtccaggctatttctcacaaaaattgttagtatatggcaacaaa
gacaaaccttgtccaaagtgcggtacaaaagttgaaagtttaatgataggacaacggaat
agtttctattgccctaaatgtcagaagaaataa
DBGET
integrated database retrieval system
