Pasteurella dagmatis: 4362423_00078
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Entry
4362423_00078 CDS
T05467
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
pdag
Pasteurella dagmatis
Pathway
pdag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4362423_00078 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdag03019
]
4362423_00078 (rhlB)
Enzymes [BR:
pdag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
4362423_00078 (rhlB)
Messenger RNA biogenesis [BR:
pdag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
4362423_00078 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
CMS1
Motif
Other DBs
NCBI-ProteinID:
SNV41417
LinkDB
All DBs
Position
1:69525..70799
Genome browser
AA seq
424 aa
AA seq
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MQNNYLSQLRFSDLPLNSKVLSALERKGFEYCTPIQALSLPISLAGKDIAGQAQTGTGKT
MAFLTATFHHLLTHQSEKNTSQPRALILAPTRELAVQINNDAELLSKATNLKTGLAYGGD
GYEKQLKTIEKGVDILIGTTGRVIDYVKQGIICLDQIQVVVLDEADRMFDLGFIKDIRYL
LRKCPAPEARLTMLFSATLSYKVRELAFEDMNDPEYVEIEPLQKTGHRIKEELFYPSNQD
KMALLLTLLEEEWPERCIVFANTKHRCEEIWGYLSADGHRVGLLTGDVAQKKRLSLLKQF
TDGDLDILVATDVAARGLHISDVTHVFNYDLPDDCEDYVHRIGRTGRAGESGVSISFACE
EYAMNLPAIENYIAHSIPVSQYDAKALLELPKPHRLKRATHTAMRNHSKNDRTFANKRSV
KRHF
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaataattatttatcgcaactccgattttccgatttacccttaaattccaaggta
ttaagtgcattggaaaggaaaggtttcgaatattgtacacctattcaagcactctcattg
ccaatttcattagctggaaaagatattgcgggtcaggctcaaactgggactggcaagacg
atggcatttttaactgctacttttcaccatttattaactcatcaatctgaaaaaaacact
tcacaaccgcgagcattaattttagcaccaaccagagaattagctgttcaaattaacaat
gatgcggagttgctcagtaaagcaacaaacttaaaaacagggcttgcttatggcggtgat
ggttatgaaaaacaactaaaaactattgaaaaaggtgtagatattttaattggtacaacg
ggtcgtgtgattgattatgttaaacaaggcattatctgtttagatcaaattcaagtagta
gtgcttgatgaagcggatcgaatgtttgatctgggatttatcaaagatattcgttattta
ttacgtaaatgtcctgcaccagaagctcgtttgacaatgctgttttctgcaacgttgtca
tataaagtgcgtgaacttgcatttgaagatatgaatgatcctgagtatgtggaaattgaa
ccattacaaaaaacaggtcaccgaattaaagaagaattattttatccgtctaatcaagac
aaaatggcattattactgactttactggaggaagaatggccagagcgttgcattgttttt
gccaatacaaaacaccgatgtgaagaaatttggggttatttgtctgcagatgggcatcga
gtaggattattgacgggagatgtagcacagaaaaaacgcctttcattattgaagcagttt
acggatggtgatttagatattttagtcgcgacagacgtggcagcacgtggtttacatatt
tctgatgtaacacatgtatttaactatgacttgcctgatgattgtgaagattatgttcat
cgtattggacgcacaggaagagcaggagaaagtggagtgtcgatcagctttgcgtgcgaa
gagtatgcaatgaatttacctgcgattgaaaactatattgcgcatagtattccagtgagc
caatatgatgcgaaagcattacttgaattaccaaaaccacatcgattaaaacgtgctacg
catacagcaatgagaaatcattcaaaaaatgaccgcacttttgctaataaaagaagcgta
aagcgtcacttttaa
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