Pasteurella dagmatis: 4362423_00697
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Entry
4362423_00697 CDS
T05467
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pdag
Pasteurella dagmatis
Pathway
pdag00061
Fatty acid biosynthesis
pdag00071
Fatty acid degradation
pdag01100
Metabolic pathways
pdag01212
Fatty acid metabolism
pdag02024
Quorum sensing
pdag04146
Peroxisome
Module
pdag_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pdag00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
4362423_00697 (fadD)
00071 Fatty acid degradation
4362423_00697 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
4362423_00697 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
4362423_00697 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pdag01004
]
4362423_00697 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pdag04147
]
4362423_00697 (fadD)
Enzymes [BR:
pdag01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
4362423_00697 (fadD)
Lipid biosynthesis proteins [BR:
pdag01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
4362423_00697 (fadD)
Exosome [BR:
pdag04147
]
Exosomal proteins
Exosomal proteins of breast milk
4362423_00697 (fadD)
Exosomal proteins of breast cancer cells
4362423_00697 (fadD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF5065
AMP-binding_C_2
Actin_micro
Motif
Other DBs
NCBI-ProteinID:
SNV58986
LinkDB
All DBs
Position
1:712870..714564
Genome browser
AA seq
564 aa
AA seq
DB search
MEKPWFKNYPDGSPRELDCSKYESLLDMFDNAVREHPDRAAYINMGQILTFRKLEERSRA
FAAYLQNELKLKRGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYTPRELEHQLQDS
GAKAIVVVSNFASTLEKVVFNTDVKHVILTRMGDQLSFGKRTLVNFVVKYVKKLVPKYKL
PNAVTFREVLSVGKHRQYVRPQIERKDLAFLQYTGGTTGVAKGAMLSHGNIIVNVFQANW
IAEPFVGDRSRERKAIIALPLYHVFALTVNCLLFIELGITAVLITNPRDIDGFVKELKKH
RFIAITGVNTLFNALLNNENFKEIDFSALKLSVGGGMAIQQSVATRWHETTGCNIIEGYG
MTECSPLIAACPINMVKHNGSIGVPVPNTDVRVIREDGTEAELGEAGELWVKGEQVMQGY
WQRPEATAEVLQDGWIATGDIVVMDSDHYLRIVDRKKDMILVSGFNVYPNEIEDVVMLNY
KVAEVVAIGVPNEVSGETIKIFVVKKDDSLTRDELRKHCRQHLTGYKIPKDIEFRDELPK
SNVGKILRRVLRDEELAKRPAEEE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagccttggtttaagaattatccagatggttcgcctcgcgagctagattgttca
aaatatgaatcgttgcttgatatgtttgataatgctgtgcgtgagcatccagaccgtgct
gcgtatatcaatatgggacaaattttaacgtttcgtaaattagaagaacgtagccgagct
tttgctgcttatttacaaaatgaattaaaacttaaacgtggtgaccgagtggcattaatg
atgcccaatttattgcaatatcctatcgcattatttggtgtgttgcgtgcaggtatggta
gttgtgaatgtgaacccgctttatacaccacgtgaacttgagcatcaattacaagacagt
ggagcaaaagccattgttgttgtatcaaactttgcgtccaccttagaaaaagttgttttt
aatacagatgttaaacacgttattttaactcgtatgggtgaccaactttcatttggtaaa
cgtacattagtgaactttgtcgtgaagtacgttaaaaaattagtgccaaaatacaaatta
cctaatgcagtaactttccgtgaagtattgagtgtgggtaaacaccgtcaatatgttcgt
ccacaaatagaacgcaaagatctcgcatttttgcaatatacaggtggcacaacaggtgtt
gcaaaaggtgcaatgctgtctcatggcaacattattgtgaatgttttccaagccaattgg
atcgcagagcctttcgtaggtgatcgttcaagagaacgtaaggcaattattgcactaccg
ctttatcacgtatttgcgttgacagtaaactgtctattatttattgagttaggtattacg
gcagttttgattactaaccctcgcgatattgatggttttgttaaagaactgaagaagcac
cgctttattgctatcacaggtgtgaatacattatttaatgccttattaaataatgaaaat
ttcaaagaaattgatttttcagcactgaaattatctgtaggtggcggtatggctattcaa
caatctgtagcaactcgctggcacgaaacaacgggttgtaacatcattgagggttacggt
atgactgaatgttcaccattgattgctgcttgcccgattaatatggtgaaacacaacggt
agtattggtgtgccagtgcctaatactgatgttcgtgttattagagaagatggcacagaa
gctgaactaggtgaagcaggtgagctttgggtgaaaggcgaacaagtgatgcaaggttac
tggcaacgtcctgaagcaacagcagaagtgctccaagatggctggatagcaactggtgac
attgtggtgatggattctgaccactatttacgtattgtcgatcgtaagaaagatatgatt
ttagtatcaggtttcaacgtatacccaaatgaaattgaggacgttgtaatgttgaactat
aaagtggcagaagtagtcgcaatcggtgtcccaaatgaagtttctggcgaaactattaaa
atctttgtagtcaaaaaagatgatagtttaactcgagatgagttacgtaaacattgtcgc
caacatttaactggctataaaattccgaaagatattgaattccgtgacgaattaccgaaa
agtaatgttggaaaaattttacgtagagtgttacgtgacgaagagttggcaaaacgtcct
gctgaagaagaataa
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