Pasteurella dagmatis: 4362423_00698
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Entry
4362423_00698 CDS
T05467
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pdag
Pasteurella dagmatis
Brite
KEGG Orthology (KO) [BR:
pdag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdag03016
]
4362423_00698 (rnd)
Enzymes [BR:
pdag01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
4362423_00698 (rnd)
Transfer RNA biogenesis [BR:
pdag03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
4362423_00698 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
SNV58996
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All DBs
Position
1:714595..715770
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AA seq
391 aa
AA seq
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MPPICRIKMNKQVKEIKNPPHFQLITTDQALADVCVFAQQKSVVALDTEFVRIRTLYPQL
GLIQLYDGERVSLIDPLSIQDFSPFIALLANQNVLKVLHACSEDLEVFQHYYQQMPTPMI
DTQIMASFLSFPNSTGLATLIQHYFQLEIDKGASRTDWLARPLSDKQLVYAAADVWYLLP
LYQRMQQDLQQTPWQSAVENDCEMLLAKREQGKDPEFAYLNIPNAWRLNQQELMRLKVLA
KWRLEDAMKRDLALNFVVRGEHLWAVAKNNPKHTSELLALGLTALEVRIHGKKILHLLSQ
ANRMEEAHYPNLITRVVDDSRYKKALKLLQQQLKTLQPMDLAREVIASKRMLDGLIKWYW
IEQEDPNALPELLIGWRRDFGLAFLETLKGL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaatttgtcgtattaagatgaacaaacaagtaaaagaaattaaaaatccaccg
cactttcagctcattacaactgatcaagcattagctgatgtgtgcgtttttgctcaacaa
aaaagtgtagttgctttggacacagaatttgttcgaattcgtacactgtatcctcaatta
gggcttattcaattatatgatggcgaacgggtgagtttaattgatcctttaagtattcaa
gacttttctccttttatcgccttgttagctaatcaaaatgttttaaaagtactacacgct
tgcagtgaagatttagaggtgtttcaacattactatcaacaaatgccaacaccaatgatc
gacacgcaaattatggctagctttttaagttttccaaattcgacagggctagcaactctt
atccaacattattttcaacttgaaattgataaaggtgcctctcgaacagactggcttgct
cgccctttatcagataaacaattagtatatgctgcagcagatgtatggtatttgttgcct
ctttatcaacgaatgcaacaagatttgcaacaaactccttggcaaagtgcggtcgaaaat
gattgtgaaatgttattggccaaaagagagcagggaaaagatccagaattcgcttatttg
aatattccaaatgcttggcgcttaaatcagcaagaattaatgcgtttaaaagtgttagct
aaatggcgtttagaagatgcaatgaaacgtgatttagccttgaattttgtggtaagaggt
gagcatttatgggcagtagcgaaaaacaatcctaaacatacttctgaattgttagcactc
ggtttaacggcattggaagtacgaattcacggtaaaaaaatcttacatcttttatcacaa
gcgaatcgaatggaggaggcgcattatccaaatttaattacgcgagtagtggatgattct
cgctataaaaaagctttaaaacttctacagcaacaattgaaaaccttgcaacctatggat
ttagcaagagaagtaatcgcaagtaaacggatgttagatggtttaattaaatggtactgg
atagaacaagaggatccaaatgcattgcctgaattactaataggttggcgtcgtgatttt
ggtttagcctttttagaaacgttgaaaggtttataa
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