Pasteurella dagmatis: 4362423_00878
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Entry
4362423_00878 CDS
T05467
Symbol
ygdH
Name
(GenBank) LOG family protein YgdH
KO
K06966
pyrimidine/purine-5'-nucleotide nucleosidase [EC:
3.2.2.10
3.2.2.-]
Organism
pdag
Pasteurella dagmatis
Pathway
pdag00230
Purine metabolism
pdag00240
Pyrimidine metabolism
pdag01100
Metabolic pathways
pdag01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
pdag00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
4362423_00878 (ygdH)
00240 Pyrimidine metabolism
4362423_00878 (ygdH)
Enzymes [BR:
pdag01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.10 pyrimidine-5'-nucleotide nucleosidase
4362423_00878 (ygdH)
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Gene cluster
GFIT
Motif
Pfam:
PpnN_C
DUF4478
Lysine_decarbox
LDcluster4
STALD
Motif
Other DBs
NCBI-ProteinID:
SNV60956
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Position
1:931355..932722
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AA seq
455 aa
AA seq
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MSNNIHYVNPRGSMDQLSHLEVELLTKKVKSKLYTLYRNCSLAVLNSGAVTDDSRALLNK
YPDFDIHLVARERGVSLELHNPPEDAFVDDRIIRNIQFHLFAVLRDILFVNVLNQRINPC
NIQDSKHITNFVFSILRNAKALPVGTHPNLIVCWGGHSINQVEYQYCRAVGTELGYRELN
IITGCGPGVMEAPMKGAAIGHASQRYEKSRFIGITEPSIIASEPPNPIVNELIIMPDIEK
RLEAFVRMGHGIIIFPGGPGTFEELLYILGIKLAEDNKDQPLPLILTGPKESEEYFRTID
RFIGETLGEEARSLYEIIIDDPESVARKMSQSMHNVKVKRYQTGDSYAFNWSLKVPMDFQ
MPFVPTHDNMANLNLHRNQSTMDLIANLRRAFSGIVAGNIKPETQDRIEELGVFKLHGDA
ELLEKIDQVLQDFIEQDRMKLPDGTDYEPCYELVK
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataatatccattatgtcaatcctcgtgggagtatggatcagctttcccatttg
gaagttgagttactcacgaaaaaagtaaaaagtaaactttatactctttatcgcaactgc
tcactggcagtgttaaattcaggtgcggtaacagacgacagccgtgcattattgaataaa
taccctgacttcgatatccacttagtagcaagggaacgaggtgtttcgctggaattacat
aatccaccagaagatgcgtttgtagatgatcgtattattcgtaatattcaattccattta
tttgcagtgttacgtgatattttatttgttaacgtgctaaaccaacgtattaatccttgt
aacattcaagacagcaaacatattaccaactttgttttctctattttacgtaatgctaaa
gctttacctgttgggacacatccgaatttaattgtatgctggggtggtcactcaataaat
caagtggaataccaatattgtcgagcagtgggaactgagttgggctatcgtgaacttaac
attattacaggttgtggaccgggtgtaatggaagcaccaatgaaaggggctgcgattggt
cacgccagccaacgctacgaaaaaagccgtttcatagggattacagaaccatcaattatt
gcatcagaaccaccaaatccgatcgtgaatgaattgattattatgccagatattgaaaaa
cgccttgaagcttttgtgcgtatgggacacgggatcattattttcccaggaggtccggga
acatttgaagagctactttatattctcggcattaaattagcggaagacaacaaagatcaa
ccattaccactcattctcacgggtccaaaagaaagtgaagagtactttagaaccattgat
cgttttattggtgaaactttaggtgaagaagcacgttcactttatgaaatcattattgat
gatcctgaaagtgtagctcgtaaaatgagccaatcgatgcacaatgtgaaagtaaaacgc
tatcaaactggcgattcttatgcattcaattggtctttaaaagtaccaatggatttccaa
atgccatttgtaccaacgcacgacaatatggcgaacctaaatttacatcgtaaccaatcg
acaatggatttaattgctaatttacgtcgtgccttttcaggaattgtggcaggaaatatt
aaaccagaaactcaagatcgtattgaagaactgggtgtatttaaactacacggtgatgca
gagttacttgaaaaaatcgaccaagtgctacaagactttatcgaacaagatcgtatgaaa
ttgccagatggtacagattacgagccttgttacgaactcgtcaaataa
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