Pasteurella dagmatis: 4362423_00882
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Entry
4362423_00882 CDS
T05467
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pdag
Pasteurella dagmatis
Pathway
pdag03420
Nucleotide excision repair
pdag03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pdag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
4362423_00882 (uvrD)
03430 Mismatch repair
4362423_00882 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pdag03400
]
4362423_00882 (uvrD)
Enzymes [BR:
pdag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
4362423_00882 (uvrD)
DNA repair and recombination proteins [BR:
pdag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
4362423_00882 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
4362423_00882 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
SNV61005
LinkDB
All DBs
Position
1:complement(937174..939351)
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AA seq
725 aa
AA seq
DB search
MDISELLDGLNDKQRKAVAAPLGNYLVLAGAGSGKTRVLTHRIAWLIAVEGISEGSIMAV
TFTNKAAAEMRHRIESTLANHSSQRLFGMWVGTFHSIAHRLLRAHHLDANLPQDFQILDS
DDQLRLVKRLLKLHNFDEKVFLPKQVCWYINNKKDDGLRAHQIDDNNDKHEREWIKIYQI
YQDTCDRAGLVDFAELLLRAYELWIKKPVILQRYQERFQHILVDEFQDTNKIQYAWVKLL
AGQQGNVMIVGDDDQSIYGWRGAKIENIQRFLDDFPKAETIRLEQNYRSTGNILESANHL
IANNTNRLGKNLWTEGEKGDPVGIYAAFNELDEALFVAAQIKQWIENGGKLNDCAVLYRS
NSQSRVIEEALIRSQIPYRIYGGMRFFERQEIKDALAYLRLIANRDDDAAFERVINTPAR
GIGDRTLDILRNLTRERSVTLWQATQLAIQENLLTGRAATALLRFMELIHSLQQDTAEMP
LFAQTDFVIKHSGLYEMYKQEKGEKGEVRIENLEELVTATKEFVKPDEAEDLSDLTAFLT
HASLEAGEEQASPHQEYVEMMTLHSAKGLEFPRVFMVGVEEGLFPSFRSFEEPGRLEEER
RLAYVGITRAKQKLTICYAESRRLYAKEERHLPSRFIAELPTECIQDIRLRGTVTRAMNQ
QKVGSVAPLLSDNEWKMGQKVLHAKFGQGTIINVEGSDNNTRLQIAFQNQGIKWLIAHLA
KLEKV
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggatatttcagaattattagatgggttaaatgacaaacagcgtaaggccgtggctgca
ccgttaggcaattatttagtattggcgggtgctgggagtggcaaaactcgagtattaact
catcgtatcgcatggttgattgcggtagaaggcatttctgaaggtagcattatggcggta
acttttactaataaagcagcagcagaaatgcgtcatcgtattgaaagtacacttgcaaac
cattcttctcaacgtttattcggtatgtgggtggggacttttcacagtattgctcatcgc
ttacttcgtgcgcatcatcttgatgcaaaccttccacaagatttccaaattttagactct
gatgatcaacttcgtttagttaaacgcctacttaaattgcacaattttgatgaaaaggta
tttttaccaaaacaggtgtgttggtacattaataataaaaaagatgatggtttaagagca
catcaaatagatgataataatgataaacacgaacgagagtggattaaaatttatcaaatt
tatcaagatacttgtgatcgtgctggcttagtggatttcgctgaattattgttacgagct
tatgaactttggatcaaaaagcctgtgattttgcaacgttatcaagaacgtttccaacat
attttggtggatgaattccaagatactaataaaattcaatatgcttgggttaaattgttg
gctggtcagcaaggtaacgtaatgattgttggtgatgacgatcaatcgatttatggttgg
cgtggagcaaaaattgaaaatattcaacgttttttagatgatttcccgaaagctgaaact
attcgcttagagcaaaattatcgttcaacaggcaatattcttgaaagtgcaaaccattta
attgccaataacactaaccggttaggtaaaaatttatggaccgaaggagaaaaaggcgat
cctgtcggaatttatgcggcattcaatgaattagacgaggctttatttgttgcagcacaa
atcaaacaatggatagaaaatggtggcaaattaaatgattgtgcagtgctttatcgtagc
aatagccaatcacgtgtgattgaagaagccttgattcgttcacaaatcccttatcgtatt
tacggtggtatgcgattctttgagcgccaagaaatcaaagatgcattggcatatcttcgc
ttaattgcaaatcgagatgatgatgcagcatttgagcgtgtgattaatacaccggcgaga
ggcattggtgaccgcacgttagatattttgcgtaatttaacgcgagaacgatcagtgact
ttatggcaagccacacaattagctattcaagaaaacttacttactggccgagcggcaact
gctttattgcgctttatggaacttattcattccttacagcaagacaccgcagaaatgcca
ttgtttgcacaaacagacttcgtgattaaacattctggtttgtatgaaatgtacaagcaa
gaaaaaggcgagaaaggggaagtgcgaatcgaaaacttggaagagttagtgactgcgaca
aaagagtttgtgaaaccagatgaagcagaagacctttctgatttaaccgcatttttaact
cacgcttctttagaagctggcgaagaacaagcctcaccacaccaagaatatgtggaaatg
atgacattacactcagcaaaagggttggaattccctcgtgtgtttatggtaggggttgaa
gaggggcttttcccaagtttccgttctttcgaagagccgggacgtttagaagaagagcgt
cgccttgcctatgtgggcattactcgtgcaaaacaaaaactgacgatttgttatgcagaa
agccgccgattatatgcaaaagaagaacgtcatttaccttcacgttttattgccgaatta
ccaacagaatgtatccaagatattcgtttgcgtggtactgtgacacgtgcaatgaatcaa
caaaaagtcggttctgtcgcaccattgttatctgacaacgaatggaaaatggggcaaaaa
gtgctacacgctaaatttggacaaggtacaattattaatgtggaaggttctgacaataac
actcgtttgcaaattgctttccaaaatcaagggatcaaatggcttattgcacatttagca
aaactagaaaaagtttaa
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