Pasteurella dagmatis: 4362423_01445
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Entry
4362423_01445 CDS
T05467
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pdag
Pasteurella dagmatis
Pathway
pdag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
4362423_01445 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdag03019
]
4362423_01445 (recQ)
03400 DNA repair and recombination proteins [BR:
pdag03400
]
4362423_01445 (recQ)
Enzymes [BR:
pdag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
4362423_01445 (recQ)
Messenger RNA biogenesis [BR:
pdag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
4362423_01445 (recQ)
DNA repair and recombination proteins [BR:
pdag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
4362423_01445 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HEM4
Motif
Other DBs
NCBI-ProteinID:
SNV74126
LinkDB
All DBs
Position
1:complement(1544164..1546059)
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AA seq
631 aa
AA seq
DB search
MFSDVVQKSVNQSAVDFSEISLKRVALNVLQSTFGYQSFRKGQEEVIESALAGKDSLVIM
ATGNGKSLCYQIPALCFDGLTLVISPLISLMKDQVDQLLANGIEADYLNSSQTFAEQQNV
HSKVMSGTLKLLYVSPEKVMTNSFFHLISHCKVSFIAIDEAHCISQWGHDFRPEYTQLGG
LKHAFPNAPIMALTATADHATRQDILVHLKLEQPYIYIGSFDRPNIRYTLIEKYKPMEQL
CRFVLGQKGKSGIIYCNSRNKVERVAESLRNKGVKAQAYHAGMETTQREDVQRAFQRDDL
QVVVATIAFGMGINKSNVRFVAHFDLPRSIESYYQETGRAGRDDLPAEAVLFYEPADYAW
LHKILFEKPETPQRQIEELKLQAIGEFAESQTCRRLVLLNYFGEHRQQPCQNCDICLDPP
KQYDGLIDAQKVMSTIYRVGQRFGIHYIVAVLRGLSNQKIKDHQHDELTVYGIGKDKSKE
HWQSVIRQLIHLGLIKQVFDHFNTTLQLTESAKPFLRGEKPLSLAMPRLSSLHAITAPQK
SAVQHYDKDLFARLRFLRKQIADKENIPSYIVFNDATLQEMAQYQPTSNIEMLQINGVGS
IKLERFAQPFIALIQEHKATLAKNSNPLNLE
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgatgttgtacagaagagtgtgaatcaaagtgcggtcgatttttcggaaatt
tccttaaaacgggttgcgcttaatgtgttgcaatctactttcggctatcaaagtttccgc
aaagggcaagaagaagttattgagtctgcgttagcaggcaaagatagccttgtcattatg
gctacagggaatgggaaatccttgtgctaccaaattcctgctttgtgttttgatggatta
actttagtaatttcgcctctgatttcactaatgaaagatcaagttgatcaacttttagcg
aatggaatcgaggcggattacttaaattcaagtcaaacttttgcagagcaacaaaacgtg
catagtaaagtgatgtctggcacgttgaaattgctttatgtttcaccagaaaaagtgatg
acaaacagctttttccacttaatttcacactgtaaagtcagttttattgctattgatgaa
gcacattgcatttcacaatggggacatgatttccgccctgaatatactcaattaggtggg
ttaaaacatgcttttcctaatgcaccaatcatggcattaactgcaacagcagatcacgct
actcggcaagatattttagtgcatttgaaactagagcaaccgtatatctacattggtagt
tttgaccgtcccaatatccgttataccttaattgagaaatataaaccaatggagcaactt
tgccgttttgtgctagggcaaaaaggcaaaagtggcattatatattgtaatagtcgtaac
aaagtagaacgagtagcagaaagtttgcgtaataaaggtgttaaagcacaagcctatcac
gcaggaatggaaaccacacaacgagaagatgtgcaacgtgctttccaacgtgatgatctg
caagtagtggtagcaactatcgcatttggaatggggatcaataaatctaacgtacgtttt
gtggcgcattttgatttaccacgtagcattgaatcttattaccaagaaacaggtcgagca
gggcgtgatgatttaccagcagaggcagtgcttttttatgagccagcagattatgcgtgg
ttacataaaattttatttgaaaagcctgaaactcctcaacgccaaatcgaagaacttaaa
ttacaggcgattggtgagtttgcggaaagccaaacttgtcgccgtttagtattgcttaat
tattttggtgaacatcgtcaacaaccttgtcaaaattgtgatatttgtcttgacccaccg
aaacaatacgatggtttgattgatgcgcaaaaagtgatgtccacgatttatcgagtaggg
caacgtttcggtatacattacatcgtggctgtcctgcgtggtttgagcaatcaaaaaatt
aaagatcatcagcacgatgaacttactgtttatggcataggtaaagataaaagcaaagaa
cattggcaatcagtcattcgtcaactcattcatttaggtttaattaagcaagtttttgat
cacttcaataccacattgcaactgactgaaagtgcaaaaccttttttacgtggtgaaaag
ccactttcattagcaatgccaaggctttcttctttacacgccattactgcaccacaaaaa
agtgcagtacaacattacgataaagatttattcgcacgtttgcgtttcttgcgtaagcaa
attgcagataaagaaaatattccgtcttacattgtatttaatgatgcaaccttacaagaa
atggcacaataccagcccactagtaatattgaaatgttacaaatcaatggtgtgggaagt
attaagcttgagcgctttgctcagccatttatcgcattaattcaggaacataaagctaca
ttagcaaaaaatagtaacccattaaatttagagtaa
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