Pasteurella dagmatis: 4362423_01472
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Entry
4362423_01472 CDS
T05467
Symbol
holB_2
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
pdag
Pasteurella dagmatis
Pathway
pdag03030
DNA replication
pdag03430
Mismatch repair
pdag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pdag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
4362423_01472 (holB_2)
03430 Mismatch repair
4362423_01472 (holB_2)
03440 Homologous recombination
4362423_01472 (holB_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pdag03032
]
4362423_01472 (holB_2)
03400 DNA repair and recombination proteins [BR:
pdag03400
]
4362423_01472 (holB_2)
Enzymes [BR:
pdag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
4362423_01472 (holB_2)
DNA replication proteins [BR:
pdag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
4362423_01472 (holB_2)
DNA repair and recombination proteins [BR:
pdag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
4362423_01472 (holB_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
zf-CXXC
Asparaginase
DUF6587
Motif
Other DBs
NCBI-ProteinID:
SNV74394
LinkDB
All DBs
Position
1:1591865..1592845
Genome browser
AA seq
326 aa
AA seq
DB search
MNLYPWLQPYYQQSISAFQQGHGHHALLFKADQGLGTDQLLDALGHWLMCQNPQDQQPCG
QCHHCHLTQAHNHPDIYQLAPIENKDIGVDQVREINEKINQHAQQGGNKIIYVRGVDRLT
EAAANAMLKTLEEPRPNTYFLLQTDISSPVMPTIYSRCQAQTINPPAMAIASIWLQQQSA
VEISEIQTALRISYGRPLTALSVLEQGLLEKRREFLRQFWLFYRKCSPLELMPLFDKAIV
FHQLDWIIAFLADALKAKLHIRENWICEDLAAGIQQFSAQQNAQGLLKATQIMQQVRADL
LQINAVNQELILLDGLTRLITEVFEG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaatttatatccttggttacaaccctattatcaacaaagtatctcagcatttcagcaa
gggcatgggcatcacgcactgctgtttaaagcagatcagggcttaggtaccgatcaactg
ttagatgcattagggcactggttaatgtgtcaaaatcctcaagatcaacaaccttgtgga
caatgtcatcattgccatttaacacaagcccataatcatcccgatatttatcaattagca
ccgattgaaaataaagatattggcgttgaccaagtacgtgaaatcaatgaaaaaattaac
caacacgcacaacaaggtggcaataaaattatttatgtgcgaggcgttgatcgtttaact
gaggcggcagcaaatgcaatgcttaaaaccctagaagagcctcgccccaatacctatttt
ttattgcaaacggatatatcatcgccggtaatgccaacaatttatagtcgctgccaagcg
caaacaatcaatccaccagcaatggcaatagcaagtatttggctgcaacaacaaagtgcg
gtcgaaatttcagaaattcagaccgctcttcgtattagttatggtcgcccgttaactgca
ctttctgtgttagaacaaggtttgctagaaaaacgtcgtgagtttttacgccaattttgg
ttgttctatcgtaaatgctcaccattagaattaatgcccctttttgataaggcgattgtc
ttccatcagcttgattggattattgcatttcttgcagatgccttaaaagcgaaattacac
attcgtgaaaattggatttgtgaagatttagctgcgggcattcaacaatttagcgctcag
caaaacgcacaaggcttgctaaaagccacgcaaattatgcaacaagtgcgtgctgatttg
ctgcaaataaatgccgtcaaccaagaattaatattattagacggcttaactcgattaatt
actgaagtatttgaaggataa
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