Pasteurella dagmatis: 4362423_01536
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Entry
4362423_01536 CDS
T05467
Symbol
rfaD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pdag
Pasteurella dagmatis
Pathway
pdag00541
Biosynthesis of various nucleotide sugars
pdag01100
Metabolic pathways
pdag01250
Biosynthesis of nucleotide sugars
Module
pdag_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pdag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
4362423_01536 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pdag01005
]
4362423_01536 (rfaD)
Enzymes [BR:
pdag01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
4362423_01536 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pdag01005
]
Core region
4362423_01536 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
SNV77848
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Position
1:1660582..1661514
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNELGRTDILVVDNLKDGTKFANLVDLDIADYCDKEDFIASI
IAGDDFGDIDAIFHEGACSATTEWDGKYMMQNNYEYSKELLHYCLDRKIPFFYASSAATY
GDKTEFREEREFEAPLNVYGYSKFLFDQYVRAILPEANSPVCGFRYFNVYGPRENHKGSM
ASVAFHLNNQILKGENPKLFAGSEDFRRDFVYVGDVAAVNIWCWQNNISGIYNLGTGNAE
SFKEVAKAVVKFHGKTEADIETIPFPDHLKSRYQEYTQANLEKLRATGYDKPFKTVAEGV
AEYMAWLNRK
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgtaactggcggtgctggatttattggtagtaacattgtcaaagccttaaat
gagttagggcgtacagatattttagttgtagataatttaaaagacggtactaaatttgcc
aatttagtagatcttgatattgcagactactgcgataaagaggactttattgcgtcaatt
attgcaggcgatgattttggtgatatcgatgctattttccatgaaggtgcgtgttcagca
accactgaatgggacggtaaatatatgatgcaaaacaactatgagtattcaaaagaatta
ctgcattattgtttagatcgtaaaattccgttcttctatgcttcatctgcagccacttac
ggcgataagacagagttccgtgaagagcgtgaatttgaagcaccattaaatgtttacggt
tattcaaaattcttgtttgaccaatatgtccgtgcaattctaccagaagcgaattcacca
gtttgtggcttccgttatttcaacgtgtacggaccacgtgaaaaccacaaaggctcaatg
gcaagtgtggcattccacttaaataaccaaattctaaaaggcgaaaatccaaaattattc
gcaggtagcgaagatttccgtcgtgacttcgtatatgtgggcgatgttgccgctgtgaat
atttggtgctggcaaaacaacatttctggtatctataacttaggtacaggcaatgcagaa
tcattcaaggaagtggcaaaagctgtcgtgaaattccacggcaaaaccgaagcggatatt
gaaactattccattcccagaccacttaaaaagccgttatcaagaatacactcaagcgaat
ttagaaaaattacgcgcaactggttatgacaaaccattcaaaaccgttgctgaaggtgta
gcagaatatatggcgtggttaaatcgtaaataa
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