Pasteurella dagmatis: 4362423_01683
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Entry
4362423_01683 CDS
T05467
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pdag
Pasteurella dagmatis
Brite
KEGG Orthology (KO) [BR:
pdag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pdag03016
]
4362423_01683 (truD)
Enzymes [BR:
pdag01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
4362423_01683 (truD)
Transfer RNA biogenesis [BR:
pdag03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
4362423_01683 (truD)
Prokaryotic type
4362423_01683 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PatG_D
Motif
Other DBs
NCBI-ProteinID:
SNV79836
LinkDB
All DBs
Position
1:complement(1804773..1805780)
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AA seq
335 aa
AA seq
DB search
MELAYLQTRPEQTALLKAECADFVVKENLGYEMSGDGEFVAVKVRKTDCNTLFVGEKLAQ
FVGISERNMGYAGLKDRKAVTEQWFCLQMPGQPTPDFSQFQLEGVEILEVTRHNRKIRTG
SLDGNHFEILLRGAKETDELKVRLENLKKFGFPNYFTEQRFGRDGHNLTQALRWATGEIK
VKDRKKRSFYLSAARSEVFNLVVSERIDLQLAQQVLRGDILQLQGSHSWFQADENEDLNA
LQVRLEQQDILLTAPLIGEQNQPATDIENQIVGQHHTLLKLMAQERMKATRRPILMQAQD
LHWVFTEEGLKLYFYLPAGSYATALVRELVNVGEI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggaattggcttatttacaaactcgcccagaacaaaccgcacttttgaaagcagaatgt
gcggattttgtagtgaaagaaaaccttggttatgagatgtccggtgatggtgaatttgtt
gcggttaaagtgcgtaaaacggactgcaacacactatttgtcggtgaaaaattagcgcaa
tttgtaggcatttctgagcgtaatatgggctatgcaggcttaaaagatcgcaaagcagtg
acggaacaatggttctgcttgcaaatgccgggacaacctaccccagatttcagtcaattc
caattagagggggtggaaattctcgaagtgactcgccacaaccgtaaaatccgtacaggt
agccttgatggtaatcattttgaaattctattgcgtggtgctaaagaaactgatgagctc
aaagtgcggttagaaaacttaaagaaatttggtttcccaaactatttcactgaacagcgt
tttgggcgtgatgggcataatttaacgcaagccttacgttgggcaacaggtgaaattaaa
gtgaaagaccgcaaaaaacgcagtttttatctttcagcagcacgtagcgaagtgttcaat
ttagtagtttcagagcgtattgatttacagcttgctcaacaagttttacgtggcgatatt
ttacagctacaaggttcgcacagctggtttcaagcagatgaaaatgaagacttaaatgca
ttacaagtgcggttagaacagcaagatattttgctcacagctccattaatcggcgaacaa
aatcagccagccactgatatcgaaaatcaaattgttggtcaacatcacactttattaaaa
ctaatggcacaagagcgaatgaaagccacacgccgtccaattttaatgcaagcacaggat
ttgcattgggtatttactgaagaaggcttgaaactttatttttatttgcccgcgggcagt
tatgccaccgcattggtgagagaattagtaaatgttggagagatttag
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