Pasteurella dagmatis: 4362423_01890
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Entry
4362423_01890 CDS
T05467
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pdag
Pasteurella dagmatis
Pathway
pdag03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pdag00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
4362423_01890 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdag03021
]
4362423_01890 (rpoA)
03400 DNA repair and recombination proteins [BR:
pdag03400
]
4362423_01890 (rpoA)
Enzymes [BR:
pdag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
4362423_01890 (rpoA)
Transcription machinery [BR:
pdag03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
4362423_01890 (rpoA)
DNA repair and recombination proteins [BR:
pdag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
4362423_01890 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
RepSA
BetaGal_dom3
Motif
Other DBs
NCBI-ProteinID:
SNV82514
LinkDB
All DBs
Position
1:2021886..2022875
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AA seq
329 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQISSTHAKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVFLTLNKSGIGPVVAADITHDGD
VEIVNPEHVICHLTDENASINMRIRVQRGRGYVPASARVHAQDEERPIGRLLVDACYSPV
DRIAYNVEAARVEQRTDLDKLVIELETNGTIDPEEAIRRAATILAEQLDAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgttacagaatttttaaagccacgcttagtagatattgagcaaattagc
tcaactcatgctaaagtgatcttagaaccgttagagcgtggattcggccacactttaggt
aatgcattacgtcgtattcttctatcttcaatgccaggttgtgctgtaactgaagtggaa
attgatggcgtgttgcacgaatacagcagtaaagaaggtgttcaggaagatattcttgaa
gtgcttctaaacttaaaaggcctagcggttaaagttcagaataaagatgatgtatttctg
acattaaacaaatctggaattggccctgttgttgcagctgacatcacccatgatggagat
gttgagatagtaaatcctgagcatgttatttgccacttgacagatgagaatgcatcaatc
aatatgcgtattcgtgtgcaacgtggtagaggttatgtaccagcttctgctcgcgtacac
gctcaggatgaagaaagaccaattggtcgtctattagtagatgcctgttatagcccagta
gatcgtattgcttacaatgttgaagctgcacgtgttgaacagcgtactgacttagataag
cttgttattgagttagaaactaatggcactattgatccagaggaagcaattcgtcgtgca
gcaacaattttagcagagcaacttgatgcattcgttgatttgcgtgatgttcgtcaacca
gaagttaaggaagaaaaaccagaattcgatccgattctgttgcgtcctgttgatgactta
gagttgacagttcgttctgctaactgtttgaaagcagaaacaattcactatatcggtgat
ttagtacagcgtactgaagttgagttattaaaaacacctaaccttggtaagaaatctctt
actgaaattaaggatgttcttgcttcacgcggcttatcactaggtatgcgccttgaaaat
tggccaccagcaagtattgctgaagactag
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