Pseudomonas allii: PALTO1_18510
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Entry
PALTO1_18510 CDS
T12099
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdal Pseudomonas allii
Pathway
pdal02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PALTO1_18510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdal03021
]
PALTO1_18510
Transcription machinery [BR:
pdal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PALTO1_18510
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_23
GerE
HTH_11
HTH_40
HTH_29
HTH_28
HTH_Tnp_ISL3
Phage_antitermQ
DUF722
HTH_24
MEIOC
DUF1492
Terminase_5
HTH_Mga
HTH_17
Phage_NinH
Motif
Other DBs
NCBI-ProteinID:
BFY80682
LinkDB
All DBs
Position
complement(2064378..2064896)
Genome browser
AA seq
172 aa
AA seq
DB search
MSVGEPPFQREITQLYSEHHGWLLTWLRRKLGCRQNAADLAQDTFARILNARESVAGIRE
PRAYLSTTARRLIIDQARRKQIEQAYLHELALTMDALEGFQSPEQIHTTLEALEQIAFIL
EGMHEYSRQAFVLYYLEELTQQQIARQLKLSERTVRKYLIQALMHCSHSMDT
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgggtgaaccgccattccaacgggaaattacccagctctacagcgagcatcat
ggctggctgctcacctggctgcgacgcaaactgggctgccgccagaatgccgccgacctg
gcgcaggatacctttgcgcgcatcctgaacgcgcgcgaatcggtggccggcatccgcgaa
ccccgggcttacttgagcaccacggccaggcgcctgatcatcgaccaggcacggcgcaag
cagattgagcaggcctacttgcatgaactggccctcaccatggatgcgcttgagggattc
caatcaccggagcagatccacaccaccctcgaagccctcgaacagatcgcgtttatcctc
gaaggcatgcacgagtactcgcgtcaggcattcgtgctgtattacctcgaagaactgacc
cagcagcaaatcgcccgacagctcaaattatcggaacgcacagtgcgcaaatacctgatc
caggcgctcatgcactgcagccacagcatggacacttga
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