Pseudomonas allii: PALTO1_21290
Help
Entry
PALTO1_21290 CDS
T12099
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdal Pseudomonas allii
Pathway
pdal02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PALTO1_21290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdal03021
]
PALTO1_21290
Transcription machinery [BR:
pdal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PALTO1_21290
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
HTH_24
GerE
HTH_11
HTH_7
TnsD
LacI
HTH_Tnp_4
PhyR_sigma-like
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
BFY80960
LinkDB
All DBs
Position
complement(2370220..2370735)
Genome browser
AA seq
171 aa
AA seq
DB search
MSEILTADKHQHLRAIEALYSGHHGWLYATLKRKLGNAMDAADLAQDTFTRILASQVTVI
DQPRAYLSCVAKGILVNWYQRKALERAYLEALASVPTQEVPSPEAHFVVLETLHEIDAML
DALPPLVKRTFLLSQINGLKYQDIAEQLGVSLITVKRYMKQAFVQCLMLVE
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatcctcaccgccgacaagcaccagcacctgcgcgcgatcgaggccctgtac
agcggccatcacggctggctgtacgccacgctcaagcgcaagctcggcaacgccatggat
gcggccgacctggcccaggacactttcacgcgtatcctcgcctcccaggtcacggtgatc
gaccagccaagggcttacctgagctgcgtggccaagggcatcctggtcaactggtatcag
cgcaaggccctggaacgggcttacctggaggcgctcgccagcgtgccaacccaggaagtg
ccttcgccggaagcgcatttcgtggtgctggagaccctgcacgagatcgacgcgatgctc
gacgccctgcccccgctggtcaagcgcacgttcctgctgtcgcagatcaacggcctcaag
taccaggacatcgccgagcaattgggcgtgtcgctgatcaccgtcaaacgctacatgaaa
caggcctttgtgcagtgcctgatgctggtggaataa
DBGET
integrated database retrieval system
