Pseudomonas allii: PALTO1_46550
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Entry
PALTO1_46550 CDS
T12099
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdal Pseudomonas allii
Pathway
pdal02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PALTO1_46550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdal03021
]
PALTO1_46550
Transcription machinery [BR:
pdal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PALTO1_46550
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
GerE
HTH_3
HTH_28
DUF3080
HTH_24
HTH_31
Terminase_5
HTH_10
HTH_11
DUF722
S-Me-THD_N
DUF2774
Motif
Other DBs
NCBI-ProteinID:
BFY83486
LinkDB
All DBs
Position
complement(5192033..5192542)
Genome browser
AA seq
169 aa
AA seq
DB search
MSGADTSHSDYVGGLFRSHYDWLCSRLHRHLDSRAHAEDIAADTFVQLLSAPGVGPIRQP
RALLTTIAQRLMYQLWRRRDLERAYLNALDNDVTSTAPSSEELAQMLEALHAIDQLLDGL
HAKVKATFLLSQLNGLTYPEIAAELGISQRSVSDYMTRAFNRCLRLCLE
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgccgacacttctcacagcgactacgtgggcggattgttccgcagtcattac
gactggctgtgcagccgtttgcaccgccacctcgattcccgcgcccacgccgaagacatt
gccgccgacaccttcgtccagctcctgagtgcgccgggcgtggggccgatccgccagccc
cgcgccttgctcaccaccatcgcccagcgcctgatgtaccagttgtggcgccgccgtgac
ttggagcgtgcctacctcaacgccctcgacaatgacgtgacctccaccgcgccatcctcg
gaagagctggcgcaaatgctcgaagccctgcacgccattgaccagttgctcgacggcttg
cacgccaaggtcaaggcgacctttttgctttcgcaactcaatggcctgacctacccggaa
atcgccgccgagctggggatttcccagcgttcggtcagcgactacatgacccgcgccttc
aaccgttgcctgcggttgtgcctggaatga
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