Pseudomonas allii: PALTO1_51070
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Entry
PALTO1_51070 CDS
T12099
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pdal Pseudomonas allii
Pathway
pdal02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pdal00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PALTO1_51070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdal03021
]
PALTO1_51070
Transcription machinery [BR:
pdal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PALTO1_51070
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_23
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
BFY83938
LinkDB
All DBs
Position
complement(5684919..5685464)
Genome browser
AA seq
181 aa
AA seq
DB search
MTFPSRSLDITPMASSSSAHQVVGELYAQHHSWVVQLLRRKLGGQEQALDLAQDTFVRIL
SSGSVPVFREPRAYLTTVASRLCGQYFRRQALERAYEQSLMILEPEHMPSPETRLLVLEA
LDAVGQVLDGLGSKVREIFLLSQLDGLTYPQIAEHMDLSVNVVQKAMLKAYRHCYLAVYA
A
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgactttccccagccgttccctggatatcacaccgatggcctcatcttcttctgcccat
caggttgtgggcgaactctacgcccagcaccacagctgggtggtgcagttgttgcggcgc
aagctgggtgggcaagagcaggccttggacttggcgcaggataccttcgtgcggatcctg
agcagcggcagcgtgccggtttttcgtgagccgcgagcctacctcacgactgtcgccagc
cgtttatgcgggcagtacttccgtcgccaggcgttggagcgagcgtatgaacagtcgctg
atgatcctggagcccgaacacatgccgtcgccggaaacccgtttgctggtgcttgaagcg
ttggacgccgtcggccaggtgctggacgggttgggcagcaaggtgcgcgagatcttcctg
ctgtcccagttggatggcctgacttatccacagatcgcagagcacatggacctcagcgtg
aatgtggtgcaaaaagccatgcttaaagcctatcgccattgctatctggcggtgtacgct
gcatga
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