Pocillopora damicornis (lace coral): 113664527
Help
Entry
113664527 CDS
T05773
Name
(RefSeq) ATP-binding cassette sub-family A member 3-like
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113664527
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdam02000
]
113664527
Transporters [BR:
pdam02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113664527
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
AAA_15
AAA_22
RsgA_GTPase
AAA_30
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
113664527
NCBI-ProteinID:
XP_027035935
LinkDB
All DBs
Position
Unknown
AA seq
1702 aa
AA seq
DB search
MGKGKQFLLLLWKNVVLLKRSPVRAFFQISMPLFFIIILVILRASVVKVEPKPSRNYSAF
GIVELPPNVTQTKLAFTPNTSDVRQIMDLVAKQLVRLSVVGFQTEKEMQTFLVNEEEQNN
GKEKKKRKNVSLGGIVFNRTLYSRNIIYKIRLSSKASGSGKSPFGASPSTSWLTQLTFPV
FQKPGPRTVDNGYGGPPPYYSEGFLSLQHAVDSAIVKYIGNISALNTTVSMKRFPYPHYI
HDEFVLVIQNSLPLLLMLSLIFTALNIVQDIVYEKEKKLKESMKMMGLNGWLHWLAWFTK
YFIFLVITMALAAVFFTVKFSERGRVLNQSSRSVIFVFFLLYSISSIMFCFCISVFFSKA
NIAAAAGGILWFMNYIPYFFIQQSYDTMGLGSKLASCLLSNVAMSLGAQLIGKFEGEGTG
VQWSNLNRGPSIDDDLTLGYVFWMFAVDSVVYGLIAWYVEAVFPGDYGVPQPWYFPVLPS
YWCGKSKEVEVRNIHSMQNGTTPAATAPEFLEKDPVGLERGVEIRNLKKVFSTEKGKKTA
VNGVSLNLYEGQITVLLGHNGAGKTTLMSMLTGLFPATSGSALVNGCSISDNISGVRSSL
GLCPQHDVLFDRLTVEEHLWFFAKLKTRSSWQVKKEVDRMIECIGLSDKRQTQARALSGG
MKRKLSVGIALIGGSKVVMLDEPTSGMDPSARRFTWDLLQQHKEGRTILLTTHFMDEADI
LGDRIAIMAEGNVKCCGSSLFLKNRYGVGYHMVIVKEPSCDVSKVTAMVTSHVPTATVES
NIGAELSFILPSEATGNFENLFLELETRRKELGIASYGASVTTMEEVFLKVGEEMDSSLS
DKLQQNSKGTPSANGILDRVSIPVPSEKSSVMARMGTLGASSASYGTFGDYNNYNHTSSF
RLFRQRWYAMFVKRILHSKRHKLALISQLLLPLVYTLFALISAKTIPQPTDSPPLTLSTQ
NFLNNSVPYECDNSTCSLADKYRTQWSDESKTHPVKVEVDMGRYLLEKPSEIGVGPFNKR
DLIAATFQKQNDTVNVTAWFNNQAYHSIAVSLAAADNAILRAALGSNYTLTTVNHPLPRT
AKESANDLQRNGVGFNVAINILFGMAFLASSFVVFLVQERSNKAKHVQFVSGVDPFSYWD
SAYTWDLINFLLPTLSLLFLVAAFDVPAYTGARLGYLFILLMLYGWAIIPLMYLFSFAFR
TASTAFVVLTVFNILTGLAALLTVFILSIPGLDLLYVADDLKWAFLVLPNYCLGQGISDI
FNNYNALYYVDQFCSKVKFPLADCEKMAKDLELKFQTNYLAWDNPGIGRYLVFLALEGIV
FYSLVLLIEYGAFSACARFFKRLRAFSANVIVSQESHSADDDDVLDEKERVMRSTDKDDV
LVIRELSKVFYGNGRRSPLVAVDSLSLGVPMNECFGLLGINGAGKTTTFRMLTGDETMTS
GTALVEGFDIRTNMNKVRQRIGYCPQFDALIDQMTGREILYMYARLRGVPEVIIPDVVDT
LIQSLLLQDHADKVAGSYSGGNKRKLSTAISLVGDPPVVFLDEPTTGMDPVARRLLWDAL
SRVRADGRCIVITSHSMEECEALCTRLAIMVNGRFKCLGSPQHLKTKFGEGYTVLARVGS
DTPDTGPLKQFIEGTFPGSVLKDEHQGMVHYHIRDTSVSWAQLFGTIERVKMNYNIEDYS
VSQTTLEQVFLNFARGQRAEDE
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaggaaagcaatttttgctgttattgtggaagaatgttgtccttctcaagaga
tctccagtgcgagctttctttcaaatttcaatgccactattttttataataattcttgtc
attctgagagcctctgttgttaaagtggaacctaaaccaagccgtaactattctgcattt
ggcattgttgaattaccacccaatgtcactcaaacaaaactggcatttactcccaacaca
agtgatgtgaggcagattatggatttggttgcaaagcaacttgtgcgtttatctgttgtt
ggattccaaactgagaaagaaatgcaaacatttttagtaaatgaggaagagcagaataat
ggcaaagaaaaaaagaaaaggaaaaatgtatcccttggtggaattgtcttcaataggact
ctctactccagaaatattatttataagattcgccttagttctaaagcaagcggaagtggg
aaatcaccatttggagcatctccttcaacatcctggctcactcaattaacatttccagtg
ttccagaagccaggacctcgaactgtagataatggttatggtggccctccaccttattat
agtgaaggatttctgtctcttcaacatgctgtggattctgcaattgttaagtacatagga
aacatttcagccctgaacacaacagtgtcgatgaaacgatttccttatcctcattatatt
cacgatgaatttgtgttggtcattcaaaactctctacccttactcttgatgttgtctctt
atcttcactgccctaaacattgtacaggatattgtttatgaaaaggaaaagaaactgaag
gaatcaatgaagatgatgggtctaaatggttggctccattggttggcatggtttacaaag
tacttcatattccttgtcattaccatggccttagcagctgttttcttcactgtgaagttc
agtgaaaggggccgcgtcctgaatcaaagctcacgctctgtcatatttgtattctttctt
ctgtattcaatatcatccatcatgttctgtttctgcatcagtgtcttcttctccaaggca
aatattgctgcggctgcaggagggattctctggttcatgaactacattccatatttcttt
atccaacagtcttatgatacgatgggtctgggaagtaagctggcaagctgcctcctttct
aatgttgccatgtcattgggtgctcagttgattgggaaatttgaaggggagggaactgga
gttcagtggtcaaatctcaatcgtgggccttccattgatgatgatcttacacttggttat
gtcttttggatgtttgctgtggactcagttgtttatggtttgatagcttggtatgttgag
gcagtatttcctggtgactatggggttccacaaccttggtacttccctgttttgcccagt
tactggtgtggaaaaagcaaagaggtggaagtacgcaatattcacagtatgcaaaatggc
accacacctgcagcaactgctcctgagtttctagaaaaagatcctgttggtttggagcga
ggtgttgaaatacgaaacctgaagaaagttttctccacagagaaaggaaagaaaacagca
gtcaatggagtgtctttgaacttgtatgaagggcagattactgtacttttggggcacaat
ggggctggtaaaacaacactgatgtccatgctgactggactatttcctgccacttctggc
tctgcacttgtaaatggctgttcaatcagtgataatattagtggtgtacgcagcagtcta
ggtctctgtccccagcatgatgtgttgtttgaccgtctaactgttgaagagcatctatgg
ttctttgccaagctaaagacccgctcatcctggcaggtgaaaaaggaggttgacagaatg
atagagtgcattggtctgtcagacaagagacaaacacaggctcgtgcactgtctggtggc
atgaaaaggaaactctcagtaggaatagcactgattggtggctcaaaggttgtgatgtta
gatgaaccaacatctggtatggacccatcagcacgtaggtttacttgggatttactacag
cagcataaggaaggcaggactattcttctcaccactcactttatggatgaagcagacatt
ctcggtgataggattgccatcatggctgagggcaatgtcaaatgttgtggctcttctctg
tttcttaagaacagatatggagtgggctatcacatggtcattgtaaaggagccctcttgc
gacgtctctaaggttactgctatggtcactagtcacgtgcctacagctactgtggagagt
aatattggagccgaactttcttttattttgccaagtgaagccacaggcaactttgagaat
ctctttctggagttagagactcgccgcaaagaacttggaatcgccagttatggcgcctcg
gttacaaccatggaggaagtttttctcaaagttggagaggaaatggacagtagtctaagc
gataaacttcagcagaatagcaaaggaacaccgtcagccaacggtattttggatagggta
agtatacctgttccaagcgagaaatcctccgttatggcacgtatgggtacgttgggagcg
tcctcggccagctatggcacatttggggactacaacaactacaatcacacttccagtttc
cggctgtttcgtcagcggtggtacgcaatgtttgtgaaacgtatcttgcactccaagcgg
cacaagctggctctcatatctcagcttctacttcctctggtatatacgctgtttgctctg
atcagtgctaagaccattcctcagcctactgattctcctccgctcactctgtccacacag
aacttcttgaacaactctgttccctacgagtgtgataacagcacctgcagcttggcggat
aagtacaggactcagtggtctgatgagagcaagacacatcctgtgaaagtcgaagtcgat
atgggacggtacctgttggaaaaaccgagcgaaataggagttggccccttcaacaaaaga
gacctgattgcagccaccttccagaaacagaacgatacagtaaatgtcacagcgtggttc
aataaccaagcataccattccatcgcggtgtctctagcagctgccgacaacgccatctta
cgggctgctctgggcagtaactacacactaacgaccgttaaccacccgctgccaagaact
gctaaagaatctgcaaatgatttacagcgcaatggcgtcgggttcaatgtcgcgatcaac
attttatttggtatggctttcctggcttcaagtttcgtcgtatttcttgtccaagaacga
tccaataaagcgaaacacgttcagtttgtcagcggtgtggacccatttagctactgggat
tctgcgtacacctgggacttgattaacttcctcctcccaacgctgtctcttctgttcctc
gtggctgcttttgacgtgccggcttatacaggtgctcgtcttggctatctgttcattttg
ctgatgttgtatggctgggcgattatacctctcatgtatctcttctcgttcgcgtttcga
actgcatcaactgcctttgtcgttctgactgtcttcaacatcctcaccggactggctgca
ctgttgaccgtcttcattttaagtataccaggacttgaccttttgtacgtggctgatgat
cttaaatgggctttcctcgtcttgccgaactactgcctcggccaaggaatttcagacatt
ttcaataactacaatgcactgtattatgtggaccagttttgttctaaagtaaagtttccc
ctggcagactgtgaaaaaatggccaaagacctagagttgaagtttcaaacgaattatttg
gcctgggataatcctggtataggccgatacctggttttcttggctttggaaggaattgtt
ttctactctctcgtgctgttgatcgagtatggtgcatttagcgcctgcgcgcgatttttt
aagcgcttgcgcgccttctccgcaaacgtgattgtatctcaggaatcgcactcggccgat
gatgacgacgttctagacgagaaggaaagagtaatgaggtctacggacaaagacgatgtg
ctcgtaatcagggagctgagcaaggttttctatggaaacggccgtcgttctccgttggtt
gctgtggatagtttaagtcttggtgtccctatgaatgagtgttttggtctcttgggaatt
aacggagcagggaagaccacaaccttccgcatgttgactggtgacgagacaatgacatcc
gggacagctctggtcgaagggtttgacatcaggaccaacatgaacaaggttcggcagcgc
attggctattgtccccagtttgacgccttaatcgatcagatgaccggaagagaaatttta
tatatgtacgcgcggcttcgtggcgtaccggaagtcataataccggatgttgtggatact
ctcattcaatcgttactgcttcaggatcatgctgataaagtagccggttcttacagtggt
ggaaacaaacgcaagctgagtacagccatatcactggtaggggaccctccagtagtattt
ctggatgaacccacgactggaatggacccagtggctaggagactattatgggatgcactg
tcacgtgtacgggcggatggacgatgtatcgtgatcacgtcacacagtatggaagaatgc
gaagctctttgtacccgactcgccattatggttaatggacgtttcaaatgcctcggaagt
ccgcagcacctcaaaaccaagtttggtgagggatacactgtgttggcaagagtgggcagc
gatacaccggataccggaccgctgaaacaatttattgaaggtacattccctggcagcgtg
ttgaaggacgagcaccaaggcatggtccactatcacatccgtgacacaagcgtatcgtgg
gctcagctgtttggaacaattgagcgggtcaagatgaactacaatattgaggactactct
gttagtcagaccacattggagcaagtatttttgaactttgcgcgaggtcagagagcagaa
gacgaataa
DBGET
integrated database retrieval system
