Pocillopora damicornis (lace coral): 113664769
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Entry
113664769 CDS
T05773
Name
(RefSeq) low-density lipoprotein receptor-related protein 6-like isoform X1
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04150
mTOR signaling pathway
pdam04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113664769
04150 mTOR signaling pathway
113664769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113664769
Membrane trafficking [BR:
pdam04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
113664769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
DUF5050
SGL
Vgb_lyase
EGF_LRP2
cEGF
Motif
Other DBs
NCBI-GeneID:
113664769
NCBI-ProteinID:
XP_027036196
LinkDB
All DBs
Position
Unknown
AA seq
1674 aa
AA seq
DB search
MKFKALICLVCLYYRICLATSPRILYANRRDIRIVRPNQKNQNETIVAVGLLNAIAVDFS
YEDGYIFWTDVNDEKIKRIRMTESSNSRKVEDVISLGLKKPEGLAVDWVGKKLYWTNCGD
SDWETNRIEVANFDGSYRKVLFWKDLGLPRAIAVDPLKGFMFWTDWGEEPKIERAEMDGS
NRSVIVRQDIHWPNGLTIDYSAEKIYWTDAKLFYIAKANFDGSNRERIFKTPSQCILANQ
AHPFALTLYENKIYWTDWTTRGIHSANKNSGMRCQMVWSTTYVPMDIHAYEPKKQLPRPG
QNPCNSTLNGGCTHLCLLNTHGRSCACPTGVKLLSDGRTCEKGPFHFLLLARKGDLRRIS
LDTPDLTDVVLPVLGISHAVAIDFDPVDRYVYWSDDKKLEIKRCRLNGEDVQVVVRSELK
HPDGIAVDWVARNLYWIDTGTNRIEVSRLNGSARRVLIDENLDEPRAIVLDPTKGYMYWT
DWGKHPKIERAELDGSHRVILVNSLVAWPNGLTIDYLKQKIYWADARNDKIEVMNFDGSA
RRIILDKELPHVFGFTVLGDNLYWTDWKKRSIESANKRTGEDRRVLIDSLPHLMGLKAVN
LNLSYGSNACQRKNGGCSHLCLYRPSGPKCECPTGMELLSDKKTCILPEAFLLFSNADDI
RRISLETNNGVVIPLVGIKEANALDFSVHDMQIYWSDLTLKTISRAFLNGSNVQHLIAVD
LSYPDGLAVDWIAKNLYWTDSKLQRIELSRLDGQHRKMLIWKDLWEPRELTLDPVSGHMY
WANGGWYPKIERADLDGSNRQTIVPNVTRPTGLTIDFSAEMIFWVDTENKVIECANLNGS
NRQVIASELPKPFALTQYKDYIYWTDQKLSSIYRANKTNGMERIQIKGNIEFTIMDILVF
HGSRQEGSNLCAFRNGGCSHLCLAKPGKRKECSCPTHYTLSMIDNKTCLAPRVFMLYSTK
TEIRRILFDSSDNLDVVLPVRGLSNVQAVDFDINSHRLFWIEDSRIKFAYQNGSSGDKVI
NLDPEASPYDLAIDPYAKQLFWTDSVTNSINVYSLRNNTNLGEVFKKDGVSPRSIVLYPE
KGLMYFTNVNPKTKGIMKVPMAGADKVQLSVDNLLLFSADSPGDLAVDKEGKKLYWTDTE
LKKIEYGDLEGTNRATLVERHVLDPVGLAVYGNHVYWIDQESRWLKKIEKIGELEEDFGS
TVQASIDGLTDMIVVDMRKSTAHHPCTRNHCSHICLVGDHNKAQCSCPMELILTEDNSTC
GPPRECPPNAFSCPSGPCLLESWVCDGNPDCEPDGADEKNCSPCGDDQFACRTGGQCIDM
KKVNDGVGDCLDDSDESDCSRKCSNVEFGCHDDDCSCIALDWKCDGTLDCPNNRDEMDCD
VTPVNGTDKLPNPLHHSNLSGKMVAVIVASIIVGVIFLTVAVLICRRLKHGPDCDVTHDI
GLVVTPVLHPRPSSSASSSSSTSSRHDMFVTAPLRKGPGSAGSSHKRSKSNGTAPSLSNR
SSASQTAYDRNNLTGASCSSTASTVVTAYFHEPLNPPPSPVTERSQYTSRSRPYCESLLP
PSSCTSHRCHRPRMPPPPTPVSTDAESVGSRHQCRRVHRCRHKRYAASSCTEAAYDSDLF
APPPTPNTNYLSEATHFSDQEGPPPSPALTERHFFAHPYPPPPSPVTDAPSVIL
NT seq
5025 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaaagcattaatttgcttggtttgcctatactataggatatgtttagcgact
tctccaaggattttatacgcaaaccggagagacatcagaatagtacgaccaaatcaaaag
aaccaaaatgaaactatcgtagctgttggtcttttgaatgctatcgctgtagatttcagc
tacgaagatggatacatattttggacggatgtcaacgatgagaaaatcaaacgaattcgt
atgacggaaagttctaactcaagaaaagttgaagatgttatatctttgggtttgaaaaag
cccgaaggattagccgtagattgggtaggaaaaaagttgtattggactaattgtggagat
tctgactgggaaacaaacagaatcgaagttgcaaattttgatggatcctatcgcaaagtt
cttttctggaaagacttgggtcttccaagggcgattgcagtggatccactcaaagggttc
atgttttggacagattggggtgaagaacccaagatagagagagctgaaatggatggctct
aatcgttctgtaattgtcagacaagacattcattggcccaatgggctcacaatagactac
agtgcagagaaaatttactggacagatgcaaaattgttttatatagctaaagctaatttt
gatggttcaaaccgggagagaatatttaaaactccaagtcaatgtattttggcaaatcaa
gctcatccatttgctttgacattatatgaaaacaaaatttattggacagattggactact
agagggatacattctgcaaataaaaacagtgggatgcggtgtcaaatggtctggtcaact
acttatgtacccatggatatacatgcatatgaaccaaaaaaacagttgccaaggccaggt
caaaatccttgcaattctactctcaatggagggtgcacccatctttgtctgttgaatacg
catggtcgctcttgtgcgtgcccaactggtgtgaagcttttgtctgatggaagaacatgt
gaaaaaggtcctttccattttctattgctggcaagaaaaggggacctgcggcgtatatca
cttgatacacctgatctcacagatgttgttttaccagtgttgggaatcagtcatgcagtt
gcaatcgattttgatccagtggatagatatgtttactggagtgatgataaaaaacttgag
attaaaagatgccggttgaatggagaagatgttcaggtagtagtaaggagtgagctgaaa
catcctgatggtattgctgttgactgggtggcgcggaacttgtactggatagacacaggc
actaatagaattgaagtcagcagactaaacggctctgccagaagagttcttattgatgaa
aatcttgatgaaccaagagcaatagtattggatccaactaaagggtacatgtactggact
gattggggaaaacacccaaagattgagagagcagagcttgatgggagtcatagagtcatc
ttagtgaattccttggtcgcgtggccaaatggcctcaccattgattatctgaagcaaaag
atttactgggctgatgcaaggaatgacaagatagaagtcatgaacttcgatgggagtgcc
cgccgtattattttagataaagaattgcctcatgtgtttggctttactgtgcttggggat
aatctttattggacggactggaagaagaggtcaatagagagtgcgaacaaaagaactggt
gaagacagaagagtactgattgacagcctaccccatcttatgggactaaaagctgtaaac
cttaatctctcctatggttccaatgcctgtcagcgcaaaaatggaggctgtagtcatttg
tgtttatacaggccatcaggacccaaatgtgaatgcccaacaggaatggagcttctttct
gacaagaagacttgtatattaccagaagcttttcttttgttttcaaatgctgatgatatc
aggagaatttctttggaaaccaacaatggtgttgtcattccattggttggcattaaggaa
gcaaacgctcttgatttcagtgttcatgacatgcagatttattggtcagatttgaccctc
aagactattagtcgagcatttctgaatggtagcaatgtacagcacttgattgctgtagac
ctgtcctaccctgatggcttggctgtggactggattgccaagaatctttactggacagat
tcaaagctccagagaatagagttgtcacgactggatggccagcataggaaaatgctgatt
tggaaggatttgtgggaaccacgagaactgactcttgatcctgtgtctgggcatatgtac
tgggcaaacggtggatggtacccaaagatagagagagcagacctggatggttctaacaga
cagactatcgtcccaaatgtcactcgtccaactgggttgacaattgatttttctgcggaa
atgatattttgggttgataccgagaacaaggtgattgagtgtgcaaatttaaatggttca
aacagacaggtgattgcatcagagcttcccaaaccatttgctttgacccagtacaaggat
tacatctattggacagatcagaaactcagctcaatctaccgcgccaacaaaacgaatgga
atggagaggattcagatcaagggcaacatagaatttactatcatggatatcttggttttt
catggcagcagacaggaaggttccaatctctgtgccttcaggaatggaggatgtagtcac
ctgtgtctggctaaacctgggaagagaaaggagtgttcctgtcctacacactatacctta
tccatgattgacaataaaacttgcttagccccccgtgttttcatgctgtacagcaccaaa
acagaaattcgacgaatcctgttcgattcatccgataaccttgatgtagttttacctgtc
cgtggtctgtcaaatgttcaggccgttgattttgatattaacagccatcgtctcttctgg
atcgaagactcccgcattaaatttgcatatcaaaacggctccagtggggacaaggtcata
aaccttgatccagaggcgtctccatatgacttggccattgacccgtatgcaaagcaattg
ttttggacggactctgttactaacagtatcaatgtgtacagtttaagaaacaataccaac
ctgggagaagtgtttaagaaagacggtgtttctcctcggtcaattgtgctctatcctgag
aaagggcttatgtacttcaccaatgtcaatccaaagaccaagggtatcatgaaggtgcca
atggctggggcagacaaggtgcagctttctgttgacaatctgcttctgttcagtgctgac
tctccgggagacttagcagtggataaggaaggcaagaaactttactggactgacacggaa
ctgaagaagattgaatatggcgacctggaagggactaacagagccacgctggtggagaga
catgtcttggatcccgttggcctggcagtttatgggaatcatgtttactggatcgaccag
gagtcgcgctggctcaagaaaattgaaaagatcggtgaattggaagaagactttggcagc
acggtgcaagcctctatcgatggtttgacagatatgattgtggttgatatgaggaagtca
acagctcaccatccttgtactagaaaccattgttcacacatctgtttggtcggtgatcac
aacaaagctcagtgttcctgccctatggaattgatcctaactgaggacaattcaacttgc
ggacctccaagggaatgcccgccaaacgcgttttcctgtccaagcggaccttgcttatta
gaaagttgggtttgtgatggtaatccagactgtgagcctgatggtgccgatgaaaagaat
tgttctccttgcggcgatgaccaattcgcctgccgcactggaggtcagtgtatcgatatg
aagaaggtgaatgacggtgtgggggattgccttgacgactcggacgagtctgattgctca
cggaaatgctcgaacgttgagtttggatgccatgatgacgactgttcgtgtatcgctttg
gactggaaatgcgatggaacactagactgtcctaataatagagatgaaatggattgcgat
gttactccagtgaatggcacagacaagttacctaatcctttgcaccattcaaatctcagt
ggtaaaatggtggcagtcattgtggcgtcaatcatcgtgggtgtcatcttcctcactgtc
gctgtactcatctgtcgcaggcttaagcacggcccagactgtgacgtaactcacgatatc
ggattagtcgtgactccagttctccatcccaggccttcctcgtcagcatcgtcatcatcg
tcgacgtcatctcggcatgacatgtttgtgacagcacctttaagaaaaggtcccggatca
gcgggctcatcgcataagcgctcgaaatcaaacggaacggcgccgagcttaagcaaccgt
tcaagcgcctcacagacagcatacgaccggaacaatttaactggagcttcgtgctcgtca
accgcgtcaacagttgtcacagcatacttccatgagcccctgaacccgccgccgtcgccg
gttacggaacgttctcagtacacctcgcgatcacgtccatattgtgagtccctgttaccg
ccgtcttcatgcacgtcacacagatgtcatcggccgagaatgcctccacccccgacgcct
gtctccactgacgcggagtcggttgggagtcggcatcaatgtcgcagagttcaccgttgt
aggcacaaacgttacgcggcgtcgtcctgcacggaggcagcgtatgattcggatttattc
gcaccgcctccgacgccaaacacgaactatctttcagaagcgacacatttttcggatcag
gagggtccacctccttctcctgctttaactgaaagacacttttttgcgcatccgtatcct
cctccaccctctccagtgactgatgcgccgtcagtgattttgtaa
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integrated database retrieval system
