KEGG   Pocillopora damicornis (lace coral): 113665208
Entry
113665208         CDS       T05773                                 
Name
(RefSeq) CDK-activating kinase assembly factor MAT1-like
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03022  Basal transcription factors
pdam03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    113665208
  09124 Replication and repair
   03420 Nucleotide excision repair
    113665208
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pdam03021]
    113665208
   03400 DNA repair and recombination proteins [BR:pdam03400]
    113665208
Transcription machinery [BR:pdam03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     113665208
DNA repair and recombination proteins [BR:pdam03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     113665208
SSDB
Motif
Pfam: MAT1 zf-C3HC4_5 zf-RING_5 TRAF3_RING zf-C3HC4 DUF7432 zf-RING_2 zf-RING_6 zf-RING_4 Zn_ribbon_6
Other DBs
NCBI-GeneID: 113665208
NCBI-ProteinID: XP_027036678
LinkDB
Position
Unknown
AA seq 306 aa
MDDWQICPRCKTTKYRNPKLTLWVNVCGHKLCEGCKDTLFTRPSAACPECNTPLRLNDFR
LQQFEDLIVEKEVAIRKDILRIYNKREEDFKSEPDPLRAYNDYLEDVESIIWNLANGHEV
DETKKQIKKYEKENESLIRKNKLKWDREETFVQHQLDEQLKQEELRRVQAAMLEKQERND
KQKENEEFLDNLVKGDRSLDDIIAEHANNLQKKSLLFSAQNTQMTSVQKETFAPLPLAEG
PKFEYVAPQVITDGPVAPEMEVLAARGYLRHIRTATEGEKAGGYTSELACGRAIQEAFSA
LYIGAE
NT seq 921 nt   +upstreamnt  +downstreamnt
atggatgattggcaaatttgtccaagatgcaagacaacgaagtacagaaatccaaagcta
acgctgtgggtgaatgtgtgcggccataaattgtgtgaaggctgcaaagacacacttttc
accaggccctctgcagcatgtcctgaatgtaacacaccactgcgactcaatgacttcaga
cttcaacagtttgaagatcttatagtggagaaagaggtggccatcaggaaggatatccta
aggatttacaacaagcgtgaggaagattttaaatctgagccagatcccttaagagcatac
aatgactatctagaagatgtggagagcataatatggaatcttgcaaatggacatgaggtt
gatgagacaaagaagcaaattaaaaagtatgaaaaggaaaatgaatcactgatcaggaaa
aacaagttgaagtgggacagagaagaaactttcgttcagcaccagcttgatgagcaactc
aaacaggaggagctgcggcgtgtacaagctgctatgttggaaaaacaggagagaaatgac
aaacagaaagaaaatgaggaatttcttgacaatctggtcaaaggggatcgttcactggat
gacattatagctgaacatgcaaataatttgcagaagaaatctttgctgttttcagcacaa
aacacccaaatgacttcagtacaaaaagaaacatttgctccattgccgttagctgaagga
cccaagttcgaatatgttgctccacaagtgataactgatgggccagttgctccagaaatg
gaagtattagctgcaagaggataccttcgtcatatccgtactgccacagaaggcgagaaa
gcgggagggtatacgtctgaactagcctgtggcagagcaatacaagaagccttttcggcg
ctctatataggtgctgagtag

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