Pocillopora damicornis (lace coral): 113665432
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Entry
113665432 CDS
T05773
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04140
Autophagy - animal
pdam04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113665432
04148 Efferocytosis
113665432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pdam04131
]
113665432
Membrane trafficking [BR:
pdam04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113665432
Hops complex
113665432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
113665432
NCBI-ProteinID:
XP_027036916
LinkDB
All DBs
Position
Unknown
AA seq
833 aa
AA seq
DB search
MAHVTVDWIPLGKVYYRKIELYSMAWQEAVDLSKFTISAAPFGGPIALVSDDKHFVRVHG
SSINKPVIHIFSSAGKELASVKWDAGSIVQMGWSVTEDLLCVADDGTVLVYDIHGAIKKT
LTMGQDAKESKVIDCKIYSFAGRTGIAVLTGSYHFYVANNVEEVRSRRFFDPPGLDAPPS
SWVIMPHERGSSLLVAIDHLLYLTEKSQCNRQAVNFKEGPVNSITEMAVSYNCEYLAMFT
DTGLLWIGSADLEKVYCEYSTACLSRPKQLAWCAMGAVICYWEDCLDVIGPTKDTVRYHM
DSTVHLVQEVDGVRIIGKETHELLQRVPAAVEQVFKIGSMEPGAMLYDASKEFEKKSARA
EEYIRMIKDRLPEAVQQCIHAAAGEYEPAVQRGLLRAASFGKSFLTDTSPQAFVTMCRTL
RVLNAVRDYMVGVPLTYGQLEKLIMKTLIDRLVLRRHYCLAIRICDYLKIPKGEGASRIL
GHWACYKVQQANVDDEEIARAINSKLGETPGISYSEIASKAVDCGRTHLAIKLLDYEAKA
ADQVPLLMRMNKDDLALDKAIMSGDTDLVYMVVMHLKDNLTLGEFLMAIRHRRVALSLYI
KYCKEQDRRTLVDLFYQDDQFLNSGNAFVQDSYSEKTLEAKNKTLSKAQMSYQQGNFTFY
AKATEEHIKLMEYQDKLKEKHGKTFMDMPLSDTIYQCVLLGDLKAAEQLRKEFKVPDKRF
YWLKVRALAENKSWLELDRFSKARKSPIGYEPFFDACLEFDNRIEAEKYVPRVLPENKVA
CFVKLGKFEDAAETAFSQKSEEGLDLVLGKCASSNRTLANRIQEMKAHLRQRR
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcgcacgttactgtggactggatcccccttggaaaggtgtattacagaaaaattgag
ttatatagcatggcctggcaagaagctgtggatctttctaagtttacaataagtgctgct
ccatttgggggtccaatagctctggtgagtgatgataaacattttgtacgagtccatgga
tcatctattaacaagccagttattcatattttttcctctgctggaaaggaacttgcctct
gtcaagtgggatgcaggctcaattgttcagatgggttggtctgttactgaagatcttctg
tgtgtagctgatgatggtactgttttggtttatgacattcatggtgccatcaagaaaact
ttaaccatgggacaggatgccaaggaatcaaaggttattgattgtaaaatttatagcttt
gctggacggacaggtatagcagtactgactggtagctaccacttttatgtggccaacaat
gtggaagaggtacgaagtcgacggttttttgaccccccagggttggatgccccaccaagc
agctgggtgataatgcctcatgagagaggttcttctttgcttgtggcaattgatcatctc
ctttaccttacagaaaaaagtcaatgtaacagacaggctgtaaatttcaaggaaggacca
gtaaattccattacagagatggcagtatcttataactgtgaatacctggcaatgttcaca
gatactggattgctatggattggatctgcagatttggagaaagtctactgtgagtacagc
actgcttgtctttcaagacccaaacagctggcatggtgtgccatgggtgcagtcatctgt
tactgggaagattgtttagatgtgattggaccaacaaaagacactgttcgatatcatatg
gacagcacagtgcacttggtacaggaagtggatggagtgagaattattggcaaagagact
catgaactgttacagagagttcctgcggccgtggagcaagtgttcaaaattggttcaatg
gaacctggggccatgttgtatgatgcatctaaagaatttgagaaaaagagtgctagagcc
gaggagtacattcgcatgatcaaggatcgacttccagaagctgtacagcagtgcatccac
gcagctgcaggagagtatgagcctgcagtacaaagaggtcttttgagggccgcgtcattt
ggtaaaagcttcttaactgacacgtctccgcaggcattcgtgacaatgtgtagaactctg
agagttttaaatgctgtgcgggactacatggtcggtgtgccactcacatatggccaactg
gaaaagcttataatgaaaaccctgatcgacagacttgttttacgacgtcactactgtctg
gccattcggatctgcgattatttaaagattcctaaaggggaaggagccagtcgtattctt
ggacactgggcttgttataaagttcaacaagcaaatgttgatgacgaggagatagctcga
gccatcaattccaaactcggagagacccctgggatatcctactcggagatcgcgtccaaa
gcagtggactgtgggagaacccatcttgctatcaagctgctggactatgaagcaaaggct
gctgatcaagtcccactgctcatgcgtatgaataaagatgacttagcgcttgacaaagcg
atcatgagtggtgacacagacttagtttacatggttgtgatgcatttaaaggacaatttg
actttgggagagttcctgatggccatacgtcacaggcgtgtagccctcagcctctacatc
aagtattgtaaagaacaagaccgccgcacactcgtggacttgttttaccaagacgatcag
tttctgaacagtggcaacgcgtttgttcaagacagctacagcgaaaagacgctagaagcc
aagaataaaacgttgtcgaaggcgcagatgtcttaccagcaagggaactttacgttttat
gcaaaggcaacagaagaacacataaaactcatggaatatcaagataaactgaaggaaaag
cacggaaagacgttcatggatatgcctttaagtgataccatttaccagtgtgtacttctc
ggagacttaaaggcagccgaacaattgaggaaagagtttaaagttccagacaaaaggttc
tactggctgaaagttagggcacttgctgaaaataaaagttggttggaactagacaggttt
tcaaaagcgagaaaatctcctataggatatgagccatttttcgatgcttgccttgaattc
gacaacagaatcgaggcagaaaaatacgttcctcgggttctgccagagaacaaagtggcc
tgctttgtcaaacttgggaaattcgaagatgcggcagaaacggctttttctcagaaaagc
gaggagggtctggatctagttcttggaaaatgcgcatcatcaaatcgaacgctagccaat
cgtattcaggaaatgaaggctcatttacgccagaggcgataa
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