Pocillopora damicornis (lace coral): 113665620
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Entry
113665620 CDS
T05773
Name
(RefSeq) uncharacterized protein LOC113665620
KO
K15214
TATA box-binding protein-associated factor RNA polymerase I subunit C
Organism
pdam
Pocillopora damicornis (lace coral)
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pdam03021
]
113665620
Transcription machinery [BR:
pdam03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
113665620
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAF1C_beta-prop
TAF1C_HB
Rrn6_beta-prop
DUF629
Motif
Other DBs
NCBI-GeneID:
113665620
NCBI-ProteinID:
XP_027037139
LinkDB
All DBs
Position
Unknown
AA seq
854 aa
AA seq
DB search
MAAGKREFQGYNFPFSGQENVSQWFVDYGSPSMLNLHLEEHGKELVIYSNRSHDSQIQQL
VATQTSLPFLDPNQHSPAIKGESFTDYELSVRSLENWVSLEKANIHVENFAADHPGVMYS
TLTNLAQNELKRSPWGTCGALKSNFFLPWKVKEAWCRCELCCYFRQGFANRKSNAARVMK
DLESALPDISPFLLYDLFQESNALETTRFQYDTFLGNCLSCHPLETNNQGLLMYPSGRGL
DVLNLLHISMDPTHLMFERKESGSASLTSVLSKQQFAIHGQIRQTDFSAYNQSDIIVGVR
SQYNCSFFQSNLSTYREGLSIRPLETLALSKQAMCIAVNPYIPGEAIIVTETGGVYLWSC
DHSLQTVHQPNSPNSQELSWYQCVFAANPRCIALADAKEMNLMDFRAGKLFQKFFFSIPS
PEVDSFECVSAIQRHPQNTHHYVLATDQSLLLLDDRFLQHPVLKWRHHNEDPVQFINVNC
DTIQGCNDTRLVISGSNHQQTHCFQYFEGESQAGDVIPLNKEECYLPPQSTTLPWKVSSY
SEWYYKGLRSGLTSSPASAFRLSKPLIGICTLLHTSHPQKGFTVFQMSSVGDLFYQPFVV
RDGKNSTGNFSSNNESAAIAIDDLGPRAKILCQGWIDLANFQNENFVKSAQNQEECIEVD
IEALCDEVALLPESHPCCVLCNNKQVPNTMLLELTDSGSNICERCGLGLSHSLNLVKNQK
NEGVLTRETLCMQFEPKELGIFPDKATATDPLSKSLWLNWASFEPIPVFSSEEKGSENNE
TEKKNEKGNMVPSQAARVSKSKDLLCSARQSSEFDGTLPTNSVQNQGTPSSPQPKQVKKQ
SKVKRKQTHHVMGF
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgggtaaacgagaattccaaggttacaattttcccttctctggacaagagaat
gtttctcagtggtttgttgactatggtagtccttcaatgctaaacttacacttagaagaa
catggcaaagagttagtcatatattctaaccgatcacacgactcacaaatacaacagctg
gttgcaacccaaacaagcttgccatttcttgatcctaaccaacattctccggcaataaaa
ggggaaagttttactgattatgaactaagtgtacgctcactcgaaaattgggtcagttta
gaaaaggctaatatacatgtggagaacttcgcggcagatcatcccggcgttatgtactcg
actttgacgaaccttgcccaaaatgaattgaagcgttctccgtggggaacttgtggtgcg
ctcaagtcaaatttctttttgccgtggaaggttaaagaggcttggtgtagatgtgaactg
tgctgttattttcggcaaggttttgctaaccgaaagagtaatgctgctcgggttatgaag
gatttggaaagtgcattgccagatatctcaccttttttgttgtatgatcttttccaagaa
agtaatgcgttagagacgacacgatttcagtacgatactttcctaggaaactgtctttcc
tgtcatcctttggagaccaacaatcagggccttcttatgtatccaagtggtcgtggctta
gatgttttgaatttactacatatctcaatggatcctactcacctgatgtttgaaagaaag
gagagtggttcagcgtctcttacatcagtactttcaaagcaacagtttgcaattcatggt
caaataaggcagaccgatttctctgcctacaatcaaagtgacatcatagtgggagttcgc
tcacaatataattgctcattcttccagagtaatctaagcacgtatagagaagggctatct
ataaggcctttagagacattagctctcagtaaacaagccatgtgtattgctgttaacccc
tacattcctggagaagccatcattgtgacagaaactggtggagtgtacttgtggtcatgt
gaccactctctacagactgttcatcaacctaactctcccaacagtcaagagttgtcatgg
taccagtgtgtctttgctgcaaaccctcggtgcatagcattggcagatgcaaaagagatg
aacttgatggatttcagggctggaaaactgttccaaaagttttttttctccatcccatca
cccgaagttgactcctttgaatgtgtgtctgcaattcagcgtcacccacagaatacccac
cactatgtattggccactgatcagtcacttttgcttctagatgatcgatttcttcaacac
ccagtcttaaagtggagacatcacaatgaagacccagttcagttcattaatgttaattgt
gatacaattcaagggtgcaatgacacacggttggtgatttctggatcaaatcatcaacag
actcactgctttcagtattttgaaggcgagtcccaagcaggagatgtcatccctttaaac
aaagaagagtgttatttgccacctcaatcaacaactcttccatggaaggtatcatcctat
agtgagtggtattacaaagggctcaggagtggcctcacctcctcaccagcaagtgctttt
cgcttgtcaaaacctctcattggcatctgcaccctgttacacacctcccatcctcaaaag
ggtttcactgtctttcaaatgtcatctgttggtgatttattctaccagccatttgttgta
cgagatggcaaaaattcaacaggaaacttttcctctaataatgaaagtgctgcaattgct
attgatgaccttggtcctagagctaagattctgtgtcaaggatggattgatcttgctaat
tttcaaaatgaaaactttgtaaaatctgctcaaaatcaagaagaatgcattgaggttgac
attgaagctctttgtgatgaagtagcacttttgccagagtctcatccctgttgtgtattg
tgtaataacaagcaagttcctaacaccatgctgctggagctgacagattctggatcaaat
atttgtgaaagatgtggactggggttgagtcacagtttaaatctggtaaagaatcaaaag
aacgaaggggttcttacaagagagactctatgtatgcaatttgaaccaaaagagctggga
atttttccagataaagctacagctacagaccctctcagtaaaagtctctggttaaattgg
gcaagttttgaaccaataccggttttctcatcagaggaaaaaggatcagaaaataatgaa
actgagaagaaaaatgaaaaaggaaacatggtgccatcacaggctgcaagggtctcaaaa
tcaaaagatctgttatgttctgctagacagagcagtgaatttgatggtactcttcctacc
aattcagttcaaaatcagggcacaccatcttcaccccaaccaaaacaagtgaagaaacaa
tcaaaagtgaagagaaaacaaactcaccatgtcatgggcttctag
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