Pocillopora damicornis (lace coral): 113665820
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Entry
113665820 CDS
T05773
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
113665820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pdam02000
]
113665820
Transporters [BR:
pdam02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
113665820
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
113665820
NCBI-ProteinID:
XP_027037341
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All DBs
Position
Unknown
AA seq
635 aa
AA seq
DB search
MNMDKSKSSDMESSEKKLIEKGKEANGEQASDASGSSSAVDERDVQVVEIEDEREQWGKK
ADFLLSCIGFAVGLGNVWRFPYLCYDNGGGAFLIPYLIMLVLCGMPMFYMELAVGQYFSL
GPIGTWGAICPLFQGVGFASMMVSFLVCVYYNIIIAWCLYFLFLSFRKDVPWKSCGNWWN
SEKCYAGRIPECSSGLSNGTVVLANSTAALANSTLKNCTKAAVDDFSSPALEYWQNYVLR
LTDSIGDAGVFRWEILLCLLAAWIGVYFCMWKGVKSSGKVVYFTATFPYVVLFILFIRGV
TLPNAKEGIVYYLKPQWYRLKDPKVWVAAATQIFYSLGIGFGSLVAMGSYNKFHNNVFKD
AMMISLINCATSVFAGFVIFSTLGFMAHSLNKKIEDVASSGPGLAFVVYPEAIAQMPVSP
LWAILFFFMLLTLGLDSQFGMMEAVITGVVDEYRIFRRHKELFILVACILCFLLGLPCVT
QGGAYVLNLFDYQSGGVSLLFLAFFETVTLAWIYGTDRFSLDIEKMIGRRPGAWWWFCWR
FCAPLIMAGIFLFSVSQWGGISYGDYKYPPWAEFIGWLIALSSMLFIPGVAIYNLYMTPG
TFMERLYICLKPDPVVQKEIEERQGLEHQVELIKV
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgaacatggataagagcaagagcagtgatatggaatcgagcgaaaaaaaattgattgaa
aaagggaaagaagcaaacggcgagcaggctagtgatgctagtggcagtagcagcgctgtt
gatgaacgtgacgttcaagttgtcgagatagaggatgaacgcgaacagtgggggaagaaa
gcggattttcttctctcttgtatcggctttgcggtggggttgggaaatgtttggcggttc
ccctatttgtgctacgacaacggtggaggggctttcctcattccctacctaatcatgctt
gtgttgtgtggaatgccaatgttctacatggagttggctgttggccagtatttcagcctt
gggccaatagggacatggggtgcaatttgtccattgtttcaaggtgttggatttgcaagc
atgatggtgtctttccttgtttgtgtttactataatatcatcattgcttggtgtctttac
ttcctcttcttgtcattccgcaaagatgtaccttggaagtcgtgtggaaattggtggaac
agtgagaagtgttatgctgggcggattccagaatgttcttctggcctttctaatggcaca
gttgtccttgcaaatagcactgctgcacttgctaattcaacactcaaaaactgcacaaag
gcagcagtagatgatttttcttctccagccctagagtactggcaaaattatgtcttgcgt
ttaacagacagcattggggatgctggagtttttagatgggaaatattgctttgtttgcta
gctgcttggattggggtgtatttctgtatgtggaaaggagtcaagtcatctggaaaggtt
gtgtacttcacagcaacgttcccctatgtggtactttttattctatttatccgtggagtc
acgcttcctaatgcgaaagaagggattgtttattatttgaaacctcagtggtatcgactc
aaagatcccaaggtatgggttgcagctgcaactcagattttctactcccttggaattggc
tttggttctttggtggccatgggaagttacaacaagttccacaacaatgttttcaaagat
gcaatgatgatttctttgatcaactgtgcaactagtgtttttgctggctttgttattttc
tctacacttggcttcatggcacatagcctcaacaaaaaaattgaagatgtggcaagttca
ggtcctggcctggcctttgtggtttatccagaagccattgctcagatgccagtttcgcct
ctttgggctattctgttctttttcatgctgcttactttgggcctggacagtcagtttggt
atgatggaagcagtaattacgggagttgtggatgagtaccgcatcttcagaagacacaaa
gaactcttcatcctggtggcttgtattttgtgcttcctcctgggcttaccatgtgtcaca
cagggaggagcatacgtgctaaacctatttgactaccagtcaggaggtgtttctcttctg
ttcctggctttctttgaaactgtaaccctggcctggatttatggcactgacaggttttct
cttgacattgagaaaatgataggtcgtcgtccaggagcttggtggtggttttgctggagg
ttctgtgcacctctcatcatggcaggaatcttcttgttcagtgtatcgcaatggggtggt
atctcttatggtgactataagtatccaccatgggctgaatttattggatggcttattgcc
ttgtcttcaatgctcttcattcctggagtggcaatctacaacttgtacatgacacctggc
acatttatggagagactttacatctgcctgaaaccagacccagttgtgcaaaaagaaatt
gaggaaaggcaaggtcttgaacaccaagttgaacttataaaagtgtaa
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