Pocillopora damicornis (lace coral): 113665958
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Entry
113665958 CDS
T05773
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113665958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113665958
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113665958
mRNA degradation factors
5'-3' decay
Decapping complex
113665958
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
WDR55
ANAPC4_WD40
WDR90_beta-prop_4th
EIF3I
Motif
Other DBs
NCBI-GeneID:
113665958
NCBI-ProteinID:
XP_027037502
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MDDNARGMASKILCDLLNIGNTGTSDGSSLETQRNGERDLDDTLSESASTASSLSPQRKR
NSKEQMSDVSVSDSEGVASRMSLEPVKQVIEMKGSDDGGSKSVYGNEVEIVSDEAVSTSY
TASNKIKFNSMVNYEWELKYYRGCLLAVSSKCIAYALRGRLGYVVRLLNPETATRTLIKG
FVGTISELAFSHKDSNMLACVDEGGNVYIWVIHEKNGKLEYSVKLHIKRPTNTLSEHHRL
IWTPYMPDGEELERTEESAAEEGRPLAITHGNQLEVIDVDSLTEWCGRSEVTIDDIKQGV
GYLEITDGHTKPITEGALSPDGTVLATASEDGHIKFWQLTDKVECMHEFQPHDGRPLSCM
IFTDNQTSQDKELPMWRFLITGADYNREIKVWCTVTWTCLQTIRFSSPDIPGSSSIRSYL
KVGMDLSASYLVISDVLKKVIYVLMFHQNFDEGQAHVTSVAKFHLTHPLLSFIVGQVKLF
KLKSQGDQNGQENAESHDHGDDDIHSSHVGLDEIAAGEEKGKKYGVQLQLFCIQTRSMQE
LLVHFQPEPSIPPPTPSTLSSLTTVAGQSVIHDGLSDLSGMETGTEASTDVEEPEESTDG
PVPVRTKLLTPQAFASTALQGSTHPEAVNSSNGSSITMISGLNNSQASVDELLGSSVSSR
LSDTTVRSSNSATPQGSLAHESGILTPTTLPLPQSPVTPTSNPSAIPILNFQSSPQMASV
QNTQSPASSFEPLVAISNTETQASPFALRDKAENVLSDSKSPSANEQNRSHSPGSMERNI
EVSVDDDTRDGGDEELPESQKPEAETLEEENERERKSSSGSSTSESLRPLSARAEGNLIC
LEDDKRGEEDDVQVDGEDAFTEEGLLEQWDMNGDDGVVPTGRESPESAHALPVGTPTGYS
EIGKRPSALSSFVSTPVSTTDLPPQQVQVTMDGGLSSSLEELLSLLKAQQQDIYDLRKQL
KTYQSDQQQKMITVVNEVHQVEERVSSKLQNALAEFSREESQRLDKALRDKHSGDKKRHE
QLQSTLSQTITTTLSGKLDKSVKAEIKSAVVPSVQKVLSAVQEQLNTTLGQKLTAADTVL
KDSVAKIVKSKGVVDAIGTAAASALQGPIQVTYREAFQSTILPSFERACQNMFQQINESF
HKGTQQYLQQVTTALDNRKREEKDFFQPVMRQLESQKQSFQATTERLSSNLMADFEVMIQ
KQLSSSIEGLREEIFSRLLSEVLASVQDSVQKEMGLGLEGLRQQLSEMITSSAQNTSQQS
PSTAQTQAAVSRLLESGKVGEAFQEALTAGDLNIVMYVCENVDPEKVFSQSPCPLSQPVL
LSLIQQLSVDLAMYTDLKHKYIEEALMALDARDAITREHMPGVLEGLCQQLQTTINEASG
PMQRSLKMLLMAARSLIR
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggacgataatgctagaggaatggcttcaaaaatactttgcgacttgctgaacatcgga
aacactggaacaagtgatgggagtagtttagagacacaaagaaatggagagagagacctt
gatgatactctaagtgaatcagcatctacagcaagttctctgtctcctcaaagaaagaga
aactcaaaggaacagatgtctgatgtgtctgtctcagacagtgagggtgttgcttcaaga
atgtccctcgaacctgtcaaacaagtcattgagatgaaaggcagtgatgatggaggcagt
aaatcagtttacggaaatgaagttgaaattgtatctgatgaagcagtttcaacaagttac
acagctagtaataagataaaatttaattccatggttaattatgagtgggagctgaagtac
tacagaggatgtctattagcagttagcagcaagtgcattgcatatgctcttagaggccgt
ctaggctatgttgtaaggcttcttaatcctgagacagccactaggacactgatcaaggga
tttgttggtacaataagcgagttagcgttttcacacaaggactccaatatgctggcatgt
gtagatgagggaggtaatgtttatatctgggttatccatgaaaaaaatggaaaactcgaa
tattctgtgaagcttcatatcaaacgtcctaccaatacactctctgagcaccacagacta
atatggactccatacatgcctgatggtgaagaacttgaaagaactgaagagtctgccgct
gaagaaggccgaccactggccattacacatggaaatcagttggaggtaatagatgtagat
tctctgactgaatggtgtggcaggtctgaagtgactattgatgatataaagcaaggagta
ggatatttagaaattacagatggacacactaagccaatcacagaaggtgctctttcacct
gatggtacagtattagcaactgccagtgaagatggtcacatcaagttttggcagttgaca
gacaaagttgagtgcatgcatgaattccagcctcatgatggacgtcccctgtcttgtatg
atttttactgacaatcagacttctcaagacaaagagcttccaatgtggagatttttaatc
acaggtgctgattataacagagagattaaagtctggtgcacagttacatggacatgttta
caaacaatcagattttcttctccagatattccaggatccagctccattcgctcatacttg
aaagtaggcatggacctttcagcttcatatttggtaatttcagatgtccttaaaaaggtt
atttatgtgctgatgttccaccaaaattttgatgaaggccaagcacatgtcacatctgtg
gctaagtttcatctcacacatccactactaagttttattgttggccaagtcaagttgttt
aaactcaagtcacaaggggatcagaatggtcaggaaaatgctgaaagccatgatcatggt
gatgatgatattcactcctcgcatgttggtcttgacgaaatagctgctggagaagagaaa
gggaaaaagtatggtgttcaactgcagctcttttgcattcaaacaagatcaatgcaagaa
ctcttggttcacttccaaccagagccttctattcctccacccactccatcaactctttca
tctcttaccacagttgcagggcagtctgttatccatgatggactctctgacctaagtggt
atggaaacaggaacagaagcaagtacagatgttgaagagcctgaggagagtacagatgga
cctgttccagttagaacaaaactacttacaccacaggcgtttgcaagcactgcattgcaa
gggtcaacccaccctgaagctgtaaacagcagcaatggaagcagtattaccatgatctct
ggactgaataactcgcaagcatcagttgatgagcttctgggctcatctgtgtcatcaaga
ctgtctgacactactgtcaggtcaagcaactcggcaacacctcaaggatctttggctcat
gagagtggtattctcacaccaacaaccttgcccttgccccagtcacctgtaacaccaaca
tctaaccctagtgcaatacccattttaaactttcagtctagtccacaaatggcatcagtt
caaaacacacaaagtcctgcatcaagtttcgagcctttggtagctatttcaaatacggag
actcaagcctctccatttgcactgagagataaagcagagaatgttttaagtgattcaaag
agtccatctgctaatgaacagaacagatcacacagtcctggtagcatggaaagaaacatt
gaagtatctgttgatgatgatactagggatggaggtgatgaggaattaccagagtctcag
aaacctgaagcagaaacgctagaggaggaaaatgaaagggaaagaaaatcaagttctgga
tctagtacaagtgaaagtttgagacctttgtctgctcgtgcggaaggaaatcttatttgt
ttggaagatgataagaggggtgaagaagatgatgttcaggtagatggggaggatgcattt
acagaggaaggactgttggagcagtgggatatgaatggcgatgatggagtggtaccaact
ggacgagagagtcctgaatcagcacatgcactgccggttggtacaccaacaggctacagt
gagattggaaaacgaccttcagcattgtcaagttttgtttctactcctgtaagtacaaca
gatcttcctccccagcaggtccaagttacaatggatggtggtctttcttcatctcttgaa
gagcttctgagtttgctcaaagctcaacagcaagatatctacgaccttcgtaagcagctg
aaaacataccagtctgatcagcagcagaaaatgattacagtggtcaatgaagtacatcag
gttgaggagcgagtctcctccaaattacagaatgccctggctgaattttcacgtgaagaa
tctcagcgtttagacaaagctctgcgtgacaaacattcaggagacaaaaaaagacatgaa
caactacagagtactttgtcccaaacaatcaccactaccttgtcaggaaaattagataaa
tctgtcaaagctgaaattaagagtgctgtagtaccatcagttcagaaagtattgagtgct
gtgcaagaacaactcaacactacattagggcagaaactaactgcagcagatactgtattg
aaggatagtgttgcaaaaattgtgaaaagtaagggtgttgttgatgctattggtacagcg
gcagcaagtgcacttcagggacccattcaagtaacttaccgtgaggcatttcagagcacc
attttgccatcctttgagagggcatgccagaacatgttccaacagataaatgaatcattt
cataaaggaactcaacaatacctgcaacaggttacaacagctctggataaccgtaaaaga
gaggagaaagattttttccaacctgtaatgagacagttggaatcacaaaagcaatcattc
caagcaacaacagagaggctttcatcaaaccttatggctgactttgaagttatgatacag
aaacaactgtcatcatcaatagaaggtttgcgtgaagagatattttcacgtctgttgtct
gaagttctggcttcagtccaggactcagtgcaaaaggaaatgggcttaggattggaaggc
ctacgtcaacaattgagtgaaatgattacatcttcagcacaaaatacctcacaacagtct
cctagtactgcacaaactcaggctgcagtttccaggctgttggaatctggaaaagttgga
gaggccttccaagaggccctgacagcaggagatctaaacattgtgatgtacgtttgtgaa
aatgtggatcctgagaaagtcttttcccagtccccttgtcctttgtcacaaccagtcttg
ctgtctttaatacagcaactatctgtggatcttgcaatgtatacggatcttaagcacaaa
tacatcgaagaagctcttatggccctggatgcacgagatgccattacaagagaacatatg
cctggtgtgttagagggactatgccagcagctccaaacaaccatcaatgaagcatcaggg
cccatgcagcgctcccttaagatgttgctgatggctgcaagatcacttataagatag
DBGET
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