Pocillopora damicornis (lace coral): 113666058
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Entry
113666058 CDS
T05773
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113666058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pdam03041
]
113666058
Spliceosome [BR:
pdam03041
]
Complex B
Other components
Prp19-related factors
113666058
Complex C
113666058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH
Nup35_RRM_2
RRM_YTH1
RRM_occluded
zf-CCCH_PARP12
zf-CCCH_DUS3L
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
113666058
NCBI-ProteinID:
XP_027037613
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MATSKGANTYNRQNWENAEFPILCQTCLGDNPYVRMTRETYGRECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKLKNVCQTCLLDLEYGLPVQVRDHALGMKDDVPKSDVNKEYYTQN
VEKELANSDGTTPGGTLGKANAPSDLLLKLARTTPYYKRNRPHICSFWVKGECKRGDECP
YRHDMPTDPNDPLADQNIKDRYYGMSDPVATRLLKQASSMPSLEPPSDKSITTLYVGGLE
GKVEESDLRDYFYQFGELRSITMVPRQNCAFVCFTARASAETAAERSFNKLILKGRRLKI
MWGKSQGQQPAPGKQGGSSLAPVPGLPGALPPPPADDKSQANFFNLPPSSAPPAGPLSAI
PPTLPPPPGGLPGMPPPPMGHPLHPPPGGYPPPPPFGHPPFRPPPIPFYGAPPPPHMPPP
PRHGLPRLPPGPPPIHYPSQDPHRLGAGKSGEGGTRPPAPAAASS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcgaaaggtgcgaacacatacaatcgtcagaattgggaaaacgcggagttt
cccattctttgtcaaacatgtcttggcgataatccttatgtgcgaatgacaagggaaaca
tatggcagagaatgtaagatatgtgccagaccattcacagtttttcgttggtgtcctgga
gcacgaatgaggtttaaaaagacagaagtctgtcagacatgttcaaagctaaagaatgtt
tgtcaaacatgcttacttgatcttgaatatggtttgccagtacaagtcagggaccatgcc
cttggtatgaaagatgatgttccaaaatctgatgttaataaagagtattacactcagaat
gtagagaaagagttagcaaattcagatggcaccacacctggtggaacacttggtaaagcc
aatgcacctagtgacttgctattgaaactggccaggactacaccctattacaaaaggaac
agacctcacatctgttccttctgggtgaagggggagtgtaagcgtggagatgaatgtcca
tacaggcatgacatgcccacagatcccaatgaccctttagctgatcaaaatataaaggat
agatactatggaatgagtgatccagtagcaactcggttactcaaacaggcatcttcaatg
ccatcccttgagcctccttctgacaagtccatcactactctgtatgtaggaggattagag
ggaaaggtagaggagagtgatttaagggactacttttaccagtttggtgagcttcgatcc
ataacaatggttccaagacagaattgtgcatttgtctgtttcactgcacgagcatctgca
gaaacagcagcagaacgctcttttaataaacttatccttaaaggacggcgactgaaaatc
atgtggggcaagtcacaaggacagcaacctgcccctggaaaacaaggaggttcttctcta
gccccagtgccaggattgcctggagctcttccaccacctcctgcagatgacaaaagccaa
gcaaactttttcaacctccctccatcctcagcaccaccagcaggtcccctctctgctata
ccacccaccttacctcctcctcctggggggcttccaggcatgcctcctcctccaatgggg
caccctttacacccaccaccaggtggctacccaccccctcctccatttggtcatccacca
ttcagaccacctcccatacctttttatggggcaccacccccacctcacatgcctcctcct
cctagacatggtttgccacgccttccacctggtcctccaccaatacactatccatctcag
gatcctcatcgtctgggtgcagggaaaagtggggaaggaggtactcgtccaccagcccca
gcagctgcgagctcttag
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integrated database retrieval system
