KEGG   Pocillopora damicornis (lace coral): 113666901
Entry
113666901         CDS       T05773                                 
Name
(RefSeq) splicing factor 3A subunit 1-like isoform X1
  KO
K12825  splicing factor 3A subunit 1
Organism
pdam  Pocillopora damicornis (lace coral)
Pathway
pdam03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pdam00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113666901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pdam03041]
    113666901
Spliceosome [BR:pdam03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113666901
 Complex B
    113666901
 Complex C
   U2 SnRNP specific factors
    113666901
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2
Other DBs
NCBI-GeneID: 113666901
NCBI-ProteinID: XP_027038504
LinkDB
Position
Unknown
AA seq 672 aa
MIPKEIQYMMFSSEPEVIPAAPAPQKPKPLMQIPVTISEPPVPKEPPPEFEFMADPPSIS
ALDLNIVKLTAQFVARNGRQFLTNLMNREQRNYQFDFLRPQHSLFNYFTKLVEQYTKVLI
PPSDIKEKLQKDAYKPKEILDRVMYRVEWIKQQEREKKKLEDEKEKERVAFASVDWHDFV
VVETVEFKDNETANLPPPVSREQLGARILAQERYEQVQDDGPTPDDMEVNMDVEMEVDEP
EPTFLQVPPPPPPMKDSTGKNTDMNEVPLPPIPSEPGPKPPLPPTAPGSNIQIRRNYDPK
APKAAAPLAQTDKFLISPITGERVPAENMAEHMKISLLDPRWREQRDRVMQEKKEQEQVF
AEGMSIGSSLKQLAERRTDIFGAGDEETVIGKKIGEEDIRKPEKVTWDGHTASMAATSRL
AQQGVTIEQQIEAIHKSKGLTPSEERERIGPKVPEQDKPPEAQLPPTTTIPPPPSLSTMT
PSRAPRAPPPPPMSAMMNLPPPPPMLPPGAPPQFMGIPPPPPPGGLPRMPPPPFVNPNPP
VAPPPPSKRDMDGDDAAGKKSRTEPAEANLVPEDQFLSSNPNPVTFGVQIPNMPDKSEWK
LDGSTVRLTLPLTDQISVIKAKLHEITGMPAGKQKLQLGGIFIKDSNSLAYYNVTPASVV
QLQLKERGGRKK
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgatacctaaagaaattcaatatatgatgttttcatcagaaccagaggtcatcccagct
gctcctgctccacagaagccaaagcctctgatgcagatcccagtgacaatttcagagcca
cctgtacctaaagaacctcccccagaatttgaattcatggctgatccaccatctatatct
gcattagatctgaatatcgttaaactgactgcacagtttgtggcaaggaatggacgtcag
ttcttaactaatctcatgaacagagagcagagaaactatcagtttgacttcttacggcca
cagcacagtttgttcaactatttcaccaagcttgtggaacagtatacaaaggttttgatt
cccccaagtgatatcaaagagaagttgcaaaaggatgcttataaacccaaagagattctg
gatcgtgtcatgtaccgtgttgagtggattaaacagcaagaaagagaaaaaaagaaatta
gaggatgaaaaagaaaaagaaagagttgcatttgcatcagtggactggcatgactttgtt
gtggtggaaacagtggaatttaaagacaacgaaacagccaacttgcctccaccagtaagc
agagaacagcttggagccaggatattagcgcaggagcgatacgaacaagtacaggatgat
ggtcctacgccagatgatatggaagtcaacatggatgtggagatggaagttgacgaacca
gagccgacgtttttacaagttcctccccctccccctcctatgaaagattcaactgggaaa
aacacagacatgaatgaggtgcctcttccaccgatcccctctgaacctggccccaaaccg
cccctacctcccacagccccaggatcgaacatccaaatccggagaaattatgatccaaag
gctcctaaagcggctgcacccctggctcagacggacaagttcctgatctcaccaatcaca
ggcgagcgggttcctgcagagaacatggccgagcacatgaagataagtctgttggatccg
cgctggagggagcagagagatagagtgatgcaggagaagaaggagcaggaacaagtgttt
gctgaaggtatgtcaattggaagcagtctgaagcagctggccgagcgccgtacagatatc
tttggagctggtgacgaagagactgtcatcggtaagaagatcggagaagaagatatccga
aaaccagagaaggtcacatgggatggtcacactgcttccatggcggccacttcacgcttg
gctcaacaaggcgtgacaattgaacaacagatcgaggccatacacaaatcgaagggactc
acgccctcagaagaacgagaaagaattggacccaaagttccagagcaagataaacctccc
gaggcgcagttaccaccgaccacaactatcccgccccctccctccttgagtaccatgacc
ccatcacgagcgccacgagcgccaccaccgccccctatgtccgcgatgatgaatctgcca
ccacctccccccatgctcccccctggtgcacccccacagttcatgggtataccacctccg
ccacccccgggaggtctcccgcgcatgccgcctccaccgtttgttaaccccaatcctcct
gttgcacctcccccgccaagtaagcgagatatggacggagatgacgcggctggtaagaag
tccaggactgagccggctgaagcaaatcttgttcccgaggatcagttcctctcctccaac
cctaacccggtcacctttggtgtccaaatccctaacatgccagacaagtcagagtggaaa
ttggatggcagcacagttcgtcttactttgccgctgacggatcagatttctgtcatcaag
gctaaactgcacgagataactggtatgccagctggaaaacagaaactacagcttggggga
attttcatcaaagattccaactcgttggcatattacaatgtcactccagccagtgtagtg
cagctacaactcaaggaacgcggtggacgaaagaaataa

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