Pocillopora damicornis (lace coral): 113666996
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Entry
113666996 CDS
T05773
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
pdam
Pocillopora damicornis (lace coral)
Pathway
pdam03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pdam00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113666996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pdam03019
]
113666996
Enzymes [BR:
pdam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
113666996
Messenger RNA biogenesis [BR:
pdam03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
113666996
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
ATP_bind_1
MMR_HSR1
CbiA
AAA_18
AAA_24
nSTAND3
Motif
Other DBs
NCBI-GeneID:
113666996
NCBI-ProteinID:
XP_027038589
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
METEQEKGPPEERQQWKLEKDSELRIEIPEGKGKAQLVLLQGQGEVFGTELVRNKKFTFK
AGSNVAIFTWHGCTVEISGPVDAYVSKETPMVMYLNLHMGLEQMRQKAEAVDEPETGPRV
MVAGPVDVGKSTLCKLLSNYAVRLGRRPVFVDLDVGQGYIGIPGTMGALLIERPADIEEG
FPLQAPLVYHYGHVSPAPSEKLYNKISSKIAEVTKERFEKNKKARVSGCIINTCGWVTGT
GYRILVHAAEAFEVNVIVVLDQERLYNDLKKQFGSKVQIVHLPKSGGVVVRSQETRRETR
DNRVRDYFYGINSSFYPHIFEVKFADIKIYKIGAPAVPDSCLPLGMAPDQNETKLVPVQP
GRDLKHCVLALSAAESLEEDLVTTNTIGFVVVNDVDLDRQMMVVLSPAPRPLPRKFFLLS
DVKFMDFK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggagacagaacaagagaaaggcccacctgaagaaaggcagcaatggaaacttgaaaag
gactcagaattacgtattgaaatcccagagggaaaaggaaaagcacaacttgtgctgcta
caaggtcaaggtgaggtgtttggaactgaactggtgagaaacaagaagttcactttcaaa
gctggatcaaatgttgcaatttttacttggcatggttgcactgtagaaatctctggtcct
gttgatgcatatgtctctaaagagacaccaatggtaatgtacttgaatcttcacatggga
ctggaacagatgagacagaaggctgaagctgttgatgaaccagagactggtccaagggtg
atggttgctggcccagttgatgttgggaagtcaacactctgtaaacttttgtcgaattat
gctgttagattgggaagaagaccagtatttgttgatctggatgtgggtcagggttatatt
ggcatcccaggcacaatgggtgctcttttaattgaaagacctgctgacattgaagaagga
tttccacttcaagcaccactagtttatcactatggtcacgtgtcaccagctcccagtgaa
aagctttacaacaagatatccagcaaaatagctgaagtcacaaaagagaggtttgaaaag
aacaagaaggctcgagtcagtggatgtattatcaatacctgtggctgggtgactggaact
ggttatagaattctggtgcatgctgctgaagcatttgaagtgaatgtcattgttgttctt
gaccaagagagactttacaatgatctaaagaagcagtttggcagcaaggttcagattgtg
catctaccaaaatctggcggggtggtggtaagaagtcaagagactcgcagagaaacaaga
gataacagagtgagagactacttttatggaattaactccagtttttatccgcatattttt
gaggtcaaatttgcagacataaagatctacaagattggggcccctgctgttcctgattca
tgtctgccacttggaatggctccagatcagaatgaaaccaaactggtcccagttcaacca
ggacgtgatttgaagcactgtgtgttggcattgagcgctgctgaatcactagaagaagac
ttagttacaacaaacacaataggatttgttgtggttaatgatgttgatttagatcgtcaa
atgatggtggtgctgtctccagcgccaaggccactaccaagaaagttcttcctgctcagc
gatgtcaagtttatggacttcaaataa
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